hmmpfam - search a single seq against HMM database
HMMER 2.1.1 (Dec 1998)
Copyright (C) 1992-1998 Washington University School of Medicine
HMMER is freely distributed under the GNU General Public License (GPL).
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HMM file:                 /data11/genetics/InterProScan/iprscan/data/smart.HMMs
Sequence file:            /cdna4/rodent/full/goal/mpm/mpm01218/w3open/interpro/cnk_1/seq.in
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Query:  mKIAA1610  ( 554 res)   mpm01218

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
SANT     SWI3, ADA2, N-CoR and TFIIIB'' DNA-binding d    44.7    1.2e-08   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
SANT       1/1     326   375 ..     1    53 []    44.7  1.2e-08

Alignments of top-scoring domains:
SANT: domain 1 of 1, from 326 to 375: score 44.7, E = 1.2e-08
                   *->kkgeWteeEdelLleavkkyGkgtdndWakIakelp.gRtpkqcrer
                      +   WteeE + +++++k yG    +d+++I  +  ++R++ +c+ +
   mKIAA1610   326    ELSVWTEEECRNFEQGLKAYG----KDFHLIQANKVrTRSVGECVAF 368  

                   wrnllkp<-*
                   +++++k+   
   mKIAA1610   369 YYMWKKS    375  

//