hmmpfam - search a single seq against HMM database
HMMER 2.1.1 (Dec 1998)
Copyright (C) 1992-1998 Washington University School of Medicine
HMMER is freely distributed under the GNU General Public License (GPL).
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HMM file:                 /data11/genetics/InterProScan/iprscan/data/smart.HMMs
Sequence file:            /cdna4/rodent/full/goal/mpm/mpm03175/w3open/interpro/cnk_1/seq.in
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Query:  mKIAA1601  ( 856 res)   mpm03175

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
FHA      Forkhead associated domain                      43.6    2.7e-08   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
FHA        1/1      62   120 ..     1    49 []    43.6  2.7e-08

Alignments of top-scoring domains:
FHA: domain 1 of 1, from 62 to 120: score 43.6, E = 2.7e-08
                   *->tvtiGRss.......cdivlpspsiSRrHaeiv..dgd...yliDlg
                      +++iGRs  + ++ +++   +++  SR+Ha  + ++ +++ yl+D  
   mKIAA1601    62    PIKIGRSVarcrpaqNNATFDCKVLSRNHALVWfdHKTskfYLQDTK 108  

                   enSsNGTfVNgrrv<-*
                     SsNGTf+N +r+   
   mKIAA1601   109 --SSNGTFINSQRL    120  

//