hmmpfam - search a single seq against HMM database
HMMER 2.1.1 (Dec 1998)
Copyright (C) 1992-1998 Washington University School of Medicine
HMMER is freely distributed under the GNU General Public License (GPL).
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HMM file:                 /data11/genetics/InterProScan/iprscan/data/Pfam
Sequence file:            /cdna4/rodent/full/goal/mnh/mnh09216/w3open/interpro/cnk_1/seq.in
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Query:  mKIAA1597  ( 407 res)   mnh09216

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
C2       C2 domain                                      180.5    2.6e-50   2

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
C2         1/2     118   207 ..     1    88 []   101.9  1.2e-26
C2         2/2     267   354 ..     1    88 []    80.7  3.1e-20

Alignments of top-scoring domains:
C2: domain 1 of 2, from 118 to 207: score 101.9, E = 1.2e-26
                   *->LrVtvieAknLppkDfkngksDPYVkvslggdkkd.qkkkTkvikkt
                      L+V v ++k+L++ D k+  sDPYVk +l++dk++  kkkT v+kkt
   mKIAA1597   118    LHVFVAQCKDLAAADVKKQRSDPYVKTYLLPDKGKmGKKKTLVVKKT 164  

                   lNPvWNEtFtFevpppdlqe.tLeieVyDydrfgrddflGevs<-*
                   lNPv+NE + + +    l+ ++L ++V+++d+f+r+ flGev+   
   mKIAA1597   165 LNPVYNEILRYKIERQFLKTqKLNLSVWHRDTFKRNSFLGEVE    207  

C2: domain 2 of 2, from 267 to 354: score 80.7, E = 3.1e-20
                   *->LrVtvieAknLppkDfkngksDPYVkvslggdkkd.qkkkTkvikkt
                      ++++v+e+ +Lp     +++ + +Vk+++++d+++++++kT+ + kt
   mKIAA1597   267    VHIWVKECLDLPLLR--GSHLNSFVKCTILPDTSRkSRQKTRAVGKT 311  

                   lNPvWNEtFtFe.vpppdlqe.tLeieVyDydrfgrddflGevs<-*
                    NPv+N t++++++ p+dl e ++e++V+D+ +++ ++flG  +   
   mKIAA1597   312 TNPVFNHTMVYDgFRPEDLMEaCVELTVWDHYKLT-NQFLGGLR    354  

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