hmmpfam - search a single seq against HMM database
HMMER 2.1.1 (Dec 1998)
Copyright (C) 1992-1998 Washington University School of Medicine
HMMER is freely distributed under the GNU General Public License (GPL).
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
HMM file:                 /data11/genetics/InterProScan/iprscan/data/smart.HMMs
Sequence file:            /cdna4/rodent/full/goal/mpm/mpm02342/w3open/interpro/cnk_1/seq.in
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
Query:  mKIAA1593  ( 1058 res)   mpm02342

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
HECTc    Domain Homologous to E6-AP Carboxyl Terminus   465.3     3e-135   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
HECTc      1/1     729  1058 .]     1   407 []   465.3   3e-135

Alignments of top-scoring domains:
HECTc: domain 1 of 1, from 729 to 1058: score 465.3, E = 3e-135
                   *->nsspddLkkrskeaLeIefvvnehgvgEeglDgGGvtrEFffllske
                      +  ++d kk+    L+++f      vgE ++D+GGv++EFf l+ +e
   mKIAA1593   729    KTKNIDYKKP----LKVIF------VGEDAVDAGGVRKEFFLLIMRE 765  

                   lfnptdygLFryspndnaeksktiYigrlrylLfpnPsagfaneehlaav
                   l++p +yg+Fry+++++              l +++   ++ ++      
   mKIAA1593   766 LLDP-KYGMFRYYEDSR--------------LIWFSDKTFEDSD------ 794  

                   yFrfiGrvlGkAlyenrllDlrFarpFyKkLLgkpkgtdvtlhDleslDP
                   +F++iG+++G+A+y+++++Dl+F++++yKkLL+++    ++l+Dl++l P
   mKIAA1593   795 LFHLIGVICGLAIYNFTIVDLHFPLALYKKLLKRK----PSLDDLKELMP 840  

                   elyksLvwLilvrrKleleeDlseeskslenditeveldmaLtFsivles
                    +++s+++L                   l++ ++++e+ ++L+F+i +e+
   mKIAA1593   841 AVGRSMQQL-------------------LDYPEDDIEETFCLNFTITVEN 871  

                   dfgevkvvELkpGGsnipVTeeNkkEYVhlvieyrlnkgvekqleAFreG
                    fg  +v EL+ +G+++ V+ +N++E+V+ +++y++nk+v+  ++AF+ G
   mKIAA1593   872 -FGATEVKELVLNGADTAVNRQNRQEFVDAYVDYIFNKSVASLFDAFHAG 920  

                   FseVipeelLrylFdeeELeLLicGleeeidvddLksnTeyrggYtensq
                   F++V+  + L  lF+++EL+ ++ G+  ++d+++L++nTey+g+Y+++++
   mKIAA1593   921 FHKVCGGKVLL-LFQPNELQAMVIGNT-NYDWKELEKNTEYKGEYWADHP 968  

                   tirfkkwFWevvesFtneerrkLLqFVTGssrlPASvgGFaaLspsNGpq
                   ti   k FWev++++  e+++ +L F+TGs+r+P  + G+++L       
   mKIAA1593   969 TI---KIFWEVFHELPLEKKKQFLLFLTGSDRIP--ILGMKSL------- 1006 

                   kFtIrkagsetlsdddrLPtAhTCfNrLkLPpYsSkeiLreKLLlAIneg
                   k+ I+  g     ++++LP +hTCfN+L+LP+Y+ ke+Lr KL +AI   
   mKIAA1593  1007 KLVIQSTGG----GESYLPVSHTCFNLLDLPKYTEKETLRCKLIQAIDH- 1051 

                   RiggeGFgls<-*
                       eGF+l    
   mKIAA1593  1052 ---NEGFSLI    1058 

//