hmmpfam - search a single seq against HMM database
HMMER 2.1.1 (Dec 1998)
Copyright (C) 1992-1998 Washington University School of Medicine
HMMER is freely distributed under the GNU General Public License (GPL).
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HMM file:                 /data11/genetics/InterProScan/iprscan/data/Pfam
Sequence file:            /cdna4/rodent/full/goal/mfj/mfj49064/w3open/interpro/cnk_1/seq.in
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Query:  mKIAA1587  ( 934 res)   mfj49064

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
MAGE     MAGE family                                     59.4    7.8e-14   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
MAGE       1/1      53   597 ..     1   254 []    59.4  7.8e-14

Alignments of top-scoring domains:
MAGE: domain 1 of 1, from 53 to 597: score 59.4, E = 7.8e-14
                   *->rgQkSklckrEerlqargEtqglvgaQapaaeeqqeeasssspsqrP
                            ++ +++ lq  +  +g      p+  e  ++as+  + +  
   mKIAA1587    53    -----RDRNDPKILQGLRASEGPGTSMLPTPRE-GPSASVPPTASEG 93   

                   vSsffSytla..........................LvlgtleevpaAgg
                   +S +  +  ++++++++ ++++++++ ++++  + +L+ + +++++++  
   mKIAA1587    94 SSAPRQFIISqgpntsemptsrkgrgasrppavsagLNTAMSITASEGPN 143  

                   spspPqsPQgs.......................................
                   sp pP +P gs+  ++ + +++   +++++++++++ +++ +++++ + +
   mKIAA1587   144 SPVPPTAPKGSkayehlpvseglaiseqrhsdggpnmeptlgegpgisvp 193  

                   ..................................................
                   ++ +++++ ++++ +   +++ +++++ +++ + +++++++ +++++++ 
   mKIAA1587   194 ptfseesgisdeglsifmspnisegpginepysvsedpstsvpptdsngl 243  

                   ..................................................
                   + + +++ +++ + +   +  ++++   ++++ ++   + ++++++ +++
   mKIAA1587   244 ginlpptfgeglsismlfsaleepdifapppsaeglfasmsppsgeiqss 293  

                   ..................................................
                     ++   ++ + + +++++++ +++ ++   ++++++ ++ +++ ++ + 
   mKIAA1587   294 wvspiimegcnvnvpptskkglrtsvpsaacespstsaeglssslssisa 343  

                   ..................................................
                   ++  ++  +   +++ +  + ++++++++ +  ++++++++ +   ++++
   mKIAA1587   344 egfcsslapcaaegscellpcgegrstselhclgegsstsqmslaaegps 393  

                   asstitava....aktslsqSdEGssSqv.....................
                   as  +t ++++++a +s+ +S+   +S  +  ++ ++++ +++++++  +
   mKIAA1587   394 ASGMPTEANnpeeA-LSCCASERRNKSTSralqkakdpsvrpkredrfld 442  

                   ..vLqeEEgpstSqa......ltsteslfkdpLtrKvaeLVqFLLrKYkm
                    +vL +++++ +    + ++++  +   ++dp  + vaeL qFLL+K++ 
   mKIAA1587   443 fqVLRDSKNSNSITImglgtsRVALTLKPQDPMEQNVAELLQFLLLKDQT 492  

                   KepvTKAEMLksViknYKdhFPeIFrKASerlelVFGidLKEVDPtgHsY
                   K p+  ++M + ++k Y+++FPeI+r+A + le +F  +LKE D   H Y
   mKIAA1587   493 KYPIKESDMREFIDKDYRHQFPEILRRAAVHLECIFRFELKELDTEEHIY 542  

                   vLVtkLgLsydGlLsdnqsmPktGLLiivLgvIFmkGncApEEeIWEfLs
                   +L +kLg+   + L d    Pk GLL+++Lg I+++Gn A+E  IWE L 
   mKIAA1587   543 ILLNKLGPVPFEGLEDVPNGPKMGLLMMILGHILLNGNQAREADIWEMLW 592  

                   vlGvY<-*
                     Gv    
   mKIAA1587   593 RFGVQ    597  

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