hmmpfam - search a single seq against HMM database
HMMER 2.1.1 (Dec 1998)
Copyright (C) 1992-1998 Washington University School of Medicine
HMMER is freely distributed under the GNU General Public License (GPL).
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HMM file:                 /data11/genetics/InterProScan/iprscan/data/Pfam
Sequence file:            /cdna4/rodent/full/goal/mbj/mbj01092/w3open/interpro/cnk_1/seq.in
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Query:  mKIAA1581  ( 347 res)   mbj01092

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
ANKH     Progressive ankylosis protein (ANKH)           818.5   2.4e-242   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
ANKH       1/1       1   347 []     1   495 []   818.5 2.4e-242

Alignments of top-scoring domains:
ANKH: domain 1 of 1, from 1 to 347: score 818.5, E = 2.4e-242
                   *->mkkFPALtHYWPLiRFLvPLaitniAiDlGEqALnRGiAAvKEDAvE
                                                                     
   mKIAA1581     -    ----------------------------------------------- -    

                   mLAsYGLAYsLmKFFaGPmsDFKnvGLvFvnsKRDRaKAvLCmvvAGavA
                                                                     
   mKIAA1581     - -------------------------------------------------- -    

                   ivFHtLiAYsdLGYYiinKLHHvDEsvGsKtRkAFLYLAAFPllDAmAWt
                                                                   Wt
   mKIAA1581     1 ------------------------------------------------WT 2    

                   HAGiLLKHKyslLvGCAsisDvvAqvvFvaiLLHsHLECvEPlLiPiLsL
                   HAGiLLKHKys+LvGCAsisDv+AqvvFvaiLLHsHLEC+EPlLiPiLsL
   mKIAA1581     3 HAGILLKHKYSFLVGCASISDVIAQVVFVAILLHSHLECREPLLIPILSL 52   

                   YmGALvRftilgLGYYkviHDiiPersGPElGGDAtikKmLsFWWPLALi
                   YmGALvR+t+l+LGYY++iHDiiP+rsGPElGGDAti+KmLsFWWPLALi
   mKIAA1581    53 YMGALVRCTTLCLGYYRNIHDIIPDRSGPELGGDATIRKMLSFWWPLALI 102  

                   LAtqRisRPivnLFvsRDLkGssAAtEAvAvLtAtYPvGHmPYGWLtElR
                   LAtqRisRPivnLFvsRDL+GssAAtEAvA+LtAtYPvGHmPYGWLtE+R
   mKIAA1581   103 LATQRISRPIVNLFVSRDLGGSSAATEAVAILTATYPVGHMPYGWLTEIR 152  

                   AvYPAFDKnnPsnKLinsntvvtkaHiKkFtFvClALsltLCFvvFWaPn
                   AvYPAFDKnnPsnKL+n+ ++vt+aHiKkFtFvC+ALsltLCFv+FW+Pn
   mKIAA1581   153 AVYPAFDKNNPSNKLANTSNTVTSAHIKKFTFVCMALSLTLCFVMFWTPN 202  

                   vsEkiLvDiiGvDfAFAELCviPLRiFsFFPvPvtvRAHLtGWLmtLKKt
                   vsEkiL+DiiGvDfAFAELCviPLRiFsFFPvPvtvRAHLtGWLmtLKKt
   mKIAA1581   203 VSEKILIDIIGVDFAFAELCVIPLRIFSFFPVPVTVRAHLTGWLMTLKKT 252  

                   FvLAPssvLRiivLissLvvLPYlGvHGAtLGvGsLLAGFlGEstmvAlA
                   FvLAPssvLRiivLi+sLvvLPYlGvHGAtLGvGsLLAGF+GEstmvAlA
   mKIAA1581   253 FVLAPSSVLRIIVLITSLVVLPYLGVHGATLGVGSLLAGFVGESTMVALA 302  

                   ACYvYRKqKKKkeseedmaieGEDsApmtevrsaervdDivElREEdE<-
                   ACYvYRKqKKK+e+e+  a+eGEDsA mt++++ e+v+DivE+REE+E  
   mKIAA1581   303 ACYVYRKQKKKMENES--ATEGEDSA-MTDMPPTEEVTDIVEMREENE   347  

                   *
                    
   mKIAA1581     -   -    

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