hmmpfam - search a single seq against HMM database
HMMER 2.1.1 (Dec 1998)
Copyright (C) 1992-1998 Washington University School of Medicine
HMMER is freely distributed under the GNU General Public License (GPL).
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HMM file:                 /data11/genetics/InterProScan/iprscan/data/smart.HMMs
Sequence file:            /cdna4/rodent/full/goal/mpf/mpf01039/w3open/interpro/cnk_1/seq.in
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Query:  mKIAA1575  ( 1724 res)   mpf01039

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
ANK      ankyrin repeats                                 65.5    6.9e-15   3

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
ANK        1/3    1431  1461 ..     1    30 []    13.6       29
ANK        2/3    1465  1494 ..     1    30 []    21.2     0.14
ANK        3/3    1498  1527 ..     1    30 []    32.6  5.3e-05

Alignments of top-scoring domains:
ANK: domain 1 of 3, from 1431 to 1461: score 13.6, E = 29
                   *->dGrTpLHlAaengnlevvklLldkga.dina<-*
                       G T L  Aa+ g++evv + l++++ d+n    
   mKIAA1575  1431    AGETLLQRAARLGYEEVVLYCLENKVcDVNH    1461 

ANK: domain 2 of 3, from 1465 to 1494: score 21.2, E = 0.14
                   *->dGrTpLHlAaengnlevvklLldkgadina<-*
                       G+ +LH A+++g l++v++Ll++gad+n+   
   mKIAA1575  1465    AGYCALHEACARGWLNIVRHLLEYGADVNC    1494 

ANK: domain 3 of 3, from 1498 to 1527: score 32.6, E = 5.3e-05
                   *->dGrTpLHlAaengnlevvklLldkgadina<-*
                      dG  pLH A+en++le+v+lLl++gad+++   
   mKIAA1575  1498    DGTRPLHDAVENDHLEIVRLLLSYGADPTL    1527 

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