hmmpfam - search a single seq against HMM database
HMMER 2.1.1 (Dec 1998)
Copyright (C) 1992-1998 Washington University School of Medicine
HMMER is freely distributed under the GNU General Public License (GPL).
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HMM file:                 /data11/genetics/InterProScan/iprscan/data/Pfam
Sequence file:            /cdna4/rodent/full/goal/mid/mid08086/w3open/interpro/cnk_1/seq.in
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Query:  mKIAA1567  ( 668 res)   mid08086

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
Piwi     Piwi domain                                    456.8   1.8e-133   1
PAZ      PAZ domain                                     185.7    7.2e-52   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
PAZ        1/1      82   218 ..     1   160 []   185.7  7.2e-52
Piwi       1/1     316   627 ..     1   338 []   456.8 1.8e-133

Alignments of top-scoring domains:
PAZ: domain 1 of 1, from 82 to 218: score 185.7, E = 7.2e-52
                   *->qpvldfltdiltqrtrlgsdfqeeermfikkaLkGliVlttynnnkq
                      ++vld +++i +q ++l ++++ +    ++k+++Gl+V++t+++++ 
   mKIAA1567    82    CEVLD-IQNINEQTKPLTDSQRVK----FTKEIRGLKVEVTHCGQM- 122  

                   pkerrtYrIdgisfdptpnstFplkrddeegegdgkeisvaeYykekYni
                      +r+Yr++ ++ +p++++tFpl+    +++g+  e++va+Y+k+kY +
   mKIAA1567   123 ---KRKYRVCNVTRRPASHQTFPLQ----LENGQAMECTVAQYFKQKYSL 165  

                   elkypnlPllvvgkkkrrlnlgtpreqpnyLPpELCfitggqrymrkdfn
                   +lk+p+lP+l+vg++++          ++yLP+E+C+i+ gqr+++k+++
   mKIAA1567   166 QLKHPHLPCLQVGQEQK----------HTYLPLEVCNIVAGQRCIKKLTD 205  

                   lqksiaiktrasp<-*
                   +q+s++ik++a++   
   mKIAA1567   206 NQTSTMIKATARS    218  

Piwi: domain 1 of 1, from 316 to 627: score 456.8, E = 1.8e-133
                   *->livvvlpddkkedldkflYdeiKkleltdlgipsQcvllktlkkrsk
                      livv+lp +k++      Y e+K++++t lg+ +Qcv+ k+++k s+
   mKIAA1567   316    LIVVILP-GKTPV-----YAEVKRVGDTLLGMATQCVQVKNVVKTSP 356  

                   qGgrltltNvilKtNmKlGGlNyklndekeprckVCNemrviplkptlii
                   q    tl N++lK+N+KlGG+N +l++  +p          ++ +p++++
   mKIAA1567   357 Q----TLSNLCLKMNAKLGGINNVLVPHQRPS---------VFQQPVIFL 393  

                   GfDvshppArTkfDrenggrlnnpsvagvvasmdsphgtkfrgdvrlqpa
                   G Dv+hp         ++g++++ps+a+vv+smd  h++++ ++vr+q +
   mKIAA1567   394 GADVTHP---------PAGDGKKPSIAAVVGSMDG-HPSRYCATVRVQTS 433  

                   gqElltdlkk.........giiresLrsfykntrkkkPkrIivYRDGvSE
                   +qE  ++l ++++  ++ + +  e+L++fyk+tr  kP rIi+YR GvSE
   mKIAA1567   434 RQEITQELLYsqevvqdltSMAWELLIQFYKSTR-FKPTRIIYYRGGVSE 482  

                   GqfsqvlnyEvnqikeackklsesyqeqePkltvIvvqKrHhtRfFasdk
                   Gq +qv   E+ +i++ac +l+e+y+   P +t+IvvqKrHhtR+F++dk
   mKIAA1567   483 GQMKQVAWPELIAIRKACISLEEDYR---PGITYIVVQKRHHTRLFCADK 529  

                   rdggskakaqNvpPGTvVDdkitspeyydFylcsqagrqGTvkPthYtVl
                    ++  ++k++Nvp GT+VD+++t+p ++dFylcs+ag+qGT++P hY Vl
   mKIAA1567   530 MER--VGKSGNVPAGTTVDSTVTHPSEFDFYLCSHAGIQGTSRPSHYQVL 577  

                   yDdiglspdelqdLTykLCymyqrvtrpvslPaPvyYAhllAkrgrnnlk
                   +Dd+ +++delq LTy+LC++y r+tr+vs+PaP+yYA l+A+r+r++l+
   mKIAA1567   578 WDDNCFTADELQLLTYQLCHTYVRCTRSVSIPAPAYYARLVAFRARYHLV 627  

                   <-*
                      
   mKIAA1567     -     -    

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