hmmpfam - search a single seq against HMM database
HMMER 2.1.1 (Dec 1998)
Copyright (C) 1992-1998 Washington University School of Medicine
HMMER is freely distributed under the GNU General Public License (GPL).
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HMM file:                 /data11/genetics/InterProScan/iprscan/data/Pfam
Sequence file:            /cdna4/rodent/full/goal/mfj/mfj43284/w3open/interpro/cnk_1/seq.in
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Query:  mKIAA1560  ( 848 res)   mfj43284

Scores for sequence family classification (score includes all domains):
Model           Description                             Score    E-value  N 
--------        -----------                             -----    ------- ---
Acyltransferase Acyltransferase                         123.7    3.4e-33   1

Parsed for domains:
Model           Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
--------        ------- ----- -----    ----- -----      -----  -------
Acyltransferase   1/1     226   376 ..     1   165 []   123.7  3.4e-33

Alignments of top-scoring domains:
Acyltransferase: domain 1 of 1, from 226 to 376: score 123.7, E = 3.4e-33
                   *->rirvhglenl.......gpaivvaNHqSylDplvlslllykrhpwpr
                      +i+   le ++  ++++ p ++ + H+S++D+l+l ++l+++     
   mKIAA1560   226    QIHKGQLEMVkaatetnLPLLFLPVHRSHIDYLLLTFILFCH---NI 269  

                   rpvfiakkelltipllgllmrllrslgaifidRKrHmr.dpelenkkral
                   + ++ia  ++l+ip++++l++    lg +fi+R    r d+++  +k+ l
   mKIAA1560   270 KAPYIASGNNLNIPVFSTLIHK---LGGFFIRR----RlDETPDGRKDIL 312  

                   yrealke.avellrkGelsvliFPEGTrsrnkaeswpAfalhngrlllpf
                   yr+ l+ ++vellr+ +  ++iF EGTrsr+            g    + 
   mKIAA1560   313 YRALLHGhVVELLRQQQF-LEIFLEGTRSRS------------GKT-SCA 348  

                   KkWkGafrlAiq.l.ps.qagvpIvPvais<-*
                   +  +G++++++ +l+++++ ++ ++Pv+is   
   mKIAA1560   349 R--AGLLSVVVDtLsSNtIPDILVIPVGIS    376  

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