hmmpfam - search a single seq against HMM database
HMMER 2.1.1 (Dec 1998)
Copyright (C) 1992-1998 Washington University School of Medicine
HMMER is freely distributed under the GNU General Public License (GPL).
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HMM file:                 /data11/genetics/InterProScan/iprscan/data/smart.HMMs
Sequence file:            /cdna4/rodent/full/goal/mth/mth01821/w3open/interpro/cnk_1/seq.in
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Query:  mKIAA1528  ( 276 res)   mth01821

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
RING     Ring finger                                     32.3    6.4e-05   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
RING       1/1      66   126 ..     1    23 []    32.3  6.4e-05

Alignments of top-scoring domains:
RING: domain 1 of 1, from 66 to 126: score 32.3, E = 6.4e-05
                   *->CpICle......................pvvlpCgH.FCr.Ci....
                      C IC+e+    ++ ++ ++++  ++    ++++C H F+  C+    
   mKIAA1528    66    CIICMEklavasgysdmtdskalgpmvvGRLTKCSHaFHLlCLlamy 112  

                   ..........CPlC<-*
                    +++++++ +CP C   
   mKIAA1528   113 cngnkdgslqCPSC    126  

//