hmmpfam - search a single seq against HMM database
HMMER 2.1.1 (Dec 1998)
Copyright (C) 1992-1998 Washington University School of Medicine
HMMER is freely distributed under the GNU General Public License (GPL).
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HMM file:                 /data11/genetics/InterProScan/iprscan/data/smart.HMMs
Sequence file:            /cdna4/rodent/full/goal/mph/mph00170/w3open/interpro/cnk_1/seq.in
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Query:  mKIAA1523  ( 884 res)   mph00170

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
PHD      PHD zinc finger                                 50.1    2.8e-10   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
PHD        1/1     154   200 ..     1    39 []    50.1  2.8e-10

Alignments of top-scoring domains:
PHD: domain 1 of 1, from 154 to 200: score 50.1, E = 2.8e-10
                   *->yC.vCgk....g.llqCdkgCdrwyHv.Clgpple.epdg.wyCprC
                      +C  C+++ +  +l+qCd  C+  +H++Cl ppl+ +p g+w Cp++
   mKIAA1523   154    VCfTCNRscrvApLIQCD-YCPLLFHMdCLEPPLTaMPLGrWMCPNH 199  

                   k<-*
                       
   mKIAA1523   200 I    200  

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