hmmpfam - search a single seq against HMM database
HMMER 2.1.1 (Dec 1998)
Copyright (C) 1992-1998 Washington University School of Medicine
HMMER is freely distributed under the GNU General Public License (GPL).
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HMM file:                 /data11/genetics/InterProScan/iprscan/data/Pfam
Sequence file:            /cdna4/rodent/full/goal/mph/mph00170/w3open/interpro/cnk_1/seq.in
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Query:  mKIAA1523  ( 884 res)   mph00170

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
PHD      PHD-finger                                      34.1    3.2e-06   1
C1_1     Phorbol esters/diacylglycerol binding domain    -0.1       0.28   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
C1_1       1/1     144   190 ..     1    55 []    -0.1     0.28
PHD        1/1     154   202 ..     1    51 []    34.1  3.2e-06

Alignments of top-scoring domains:
C1_1: domain 1 of 1, from 144 to 190: score -0.1, E = 0.28
                   *->HhFvhrwnfkqptfCdhCgellwgslgkqGlkCswCklnvHkrChek
                      H+  +       + C  C+ ++      +  +C+ C l++H +C e 
   mKIAA1523   144    HNGLVP---LPVKVCFTCNRSC---RVAPLIQCDYCPLLFHMDCLE- 183  

                   VppeCgcg<-*
                    pp+  +    
   mKIAA1523   184 -PPLTAMP    190  

PHD: domain 1 of 1, from 154 to 202: score 34.1, E = 3.2e-06
                   *->yCsvCgkpdddaggdllqCDgCdrwfHlaClgppleeppegkWlCpe
                       C+ C++        l+qCD C+  fH++Cl ppl+++p g W Cp+
   mKIAA1523   154    VCFTCNRSCR--VAPLIQCDYCPLLFHMDCLEPPLTAMPLGRWMCPN 198  

                   Ctpk<-*
                    +++   
   mKIAA1523   199 HIEH    202  

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