hmmpfam - search a single seq against HMM database
HMMER 2.1.1 (Dec 1998)
Copyright (C) 1992-1998 Washington University School of Medicine
HMMER is freely distributed under the GNU General Public License (GPL).
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HMM file:                 /data11/genetics/InterProScan/iprscan/data/smart.HMMs
Sequence file:            /cdna4/rodent/full/goal/mbg/mbg19167/w3open/interpro/cnk_1/seq.in
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Query:  mKIAA1506  ( 1520 res)   mbg19167

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
SET      SET (Su(var)3-9, Enhancer-of-zeste, Trithora   128.9    5.4e-34   1
FYRC     "FY-rich" domain, C-terminal region            121.4    9.9e-32   1
FYRN     "FY-rich" domain, N-terminal region             86.8    2.6e-21   1
PostSET  Cysteine-rich motif following a subset of SE    36.0    4.9e-06   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
FYRN       1/1    1174  1217 ..     1    46 []    86.8  2.6e-21
FYRC       1/1    1223  1310 ..     1    97 []   121.4  9.9e-32
SET        1/1    1380  1502 ..     1   114 []   128.9  5.4e-34
PostSET    1/1    1504  1520 .]     1    17 []    36.0  4.9e-06

Alignments of top-scoring domains:
FYRN: domain 1 of 1, from 1174 to 1217: score 86.8, E = 2.6e-21
                   *->llpiqsklfhsesaIfPvGYkatRkYwSvkdPnrrclYtiscvIde<
                      llp+q+++fhs++a+fPvGY+a+R+YwS++++nrrc+Y   c+I+e 
   mKIAA1506  1174    LLPQQMQAFHSPKALFPVGYEASRLYWSTRYANRRCRY--LCSIEE  1217 

                   -*
                     
   mKIAA1506     -    -    

FYRC: domain 1 of 1, from 1223 to 1310: score 121.4, E = 9.9e-32
                   *->lFrvevesdpledeqFkgeSpekcWemvlerVqearkaadlqgLkss
                      +F++++ +++ ed++ +++Sp ++W ++le+V+  rk++ +      
   mKIAA1506  1223    VFVIRIVEQGHEDLVLSDSSPKDVWDKILEPVACVRKKSEM------ 1263 

                   lqllpegvsidGeeMFGlsspavvkliEsLpgveqctnYwfrkygrspll
                   lql+p++++  Ge++FGl++ av +++EsLpgve c+nY+fr ygr+pl+
   mKIAA1506  1264 LQLFPAYLK--GEDLFGLTVSAVARIAESLPGVEACENYTFR-YGRNPLM 1310 

                   <-*
                      
   mKIAA1506     -     -    

SET: domain 1 of 1, from 1380 to 1502: score 128.9, E = 5.4e-34
                   *->aklevfkskgkGwGlratedIpkGefIleyvGeii............
                       ++++++s + G+Gl+a++dI+k ++++ey+G ii+++  +++++  
   mKIAA1506  1380    SNVYLARSRIQGLGLYAARDIEKHTMVIEYIGTIIrnevanrkekly 1426 

                   ......fylfd.....ciDatranggkGniarfiNHSCePNcelifvevd
                   ++++++ y+f+ +++++iDat      G++ar+iNHSC PNc++++v  +
   mKIAA1506  1427 esqnrgVYMFRmdndhVIDATL----TGGPARYINHSCAPNCVAEVVTFE 1472 

                   gfdprgasdsadprivifAlrdIkpGEELtidYgddyege<-*
                               ++i+i + r+I +GEEL++dY++d+e++   
   mKIAA1506  1473 R----------GHKIIISSNRRIQKGEELCYDYKFDFEDD    1502 

PostSET: domain 1 of 1, from 1504 to 1520: score 36.0, E = 4.9e-06
                   *->kkqpClCGaanCrGfLg<-*
                      +k+pC+CGa+nCr++++   
   mKIAA1506  1504    HKIPCHCGAVNCRKWMN    1520 

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