hmmpfam - search a single seq against HMM database
HMMER 2.1.1 (Dec 1998)
Copyright (C) 1992-1998 Washington University School of Medicine
HMMER is freely distributed under the GNU General Public License (GPL).
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HMM file:                 /data11/genetics/InterProScan/iprscan/data/Pfam
Sequence file:            /cdna4/rodent/full/goal/mbh/mbh00174/w3open/interpro/cnk_1/seq.in
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Query:  mKIAA1504  ( 480 res)   mbh00174

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
zf-GRF   GRF zinc finger                                 86.0    7.6e-22   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
zf-GRF     1/1     384   432 ..     1    52 []    86.0  7.6e-22

Alignments of top-scoring domains:
zf-GRF: domain 1 of 1, from 384 to 432: score 86.0, E = 7.6e-22
                   *->plCpgCGeqlavlltVrKtGpNkGRkFYkCplpresqktekqCnFFq
                      plC+ CG +++++l+V+++GpN+G+ FY+Cp+++++q+ +k+C++F+
   mKIAA1504   384    PLCK-CG-RRSKRLIVSNNGPNHGKAFYCCPVGKYQQD-RKCCGYFK 427  

                   WeDen<-*
                   We++    
   mKIAA1504   428 WEQTL    432  

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