hmmpfam - search a single seq against HMM database
HMMER 2.1.1 (Dec 1998)
Copyright (C) 1992-1998 Washington University School of Medicine
HMMER is freely distributed under the GNU General Public License (GPL).
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HMM file:                 /data11/genetics/InterProScan/iprscan/data/Pfam
Sequence file:            /cdna4/rodent/full/goal/mbr/mbr03180/w3open/interpro/cnk_1/seq.in
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Query:  mKIAA1492  ( 717 res)   mbr03180

Scores for sequence family classification (score includes all domains):
Model        Description                                Score    E-value  N 
--------     -----------                                -----    ------- ---
DPPIV_N      Dipeptidyl peptidase IV (DPP IV) N-termi   662.1   2.9e-195   1
Peptidase_S9 Prolyl oligopeptidase family               163.6    3.2e-45   1

Parsed for domains:
Model        Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
--------     ------- ----- -----    ----- -----      -----  -------
DPPIV_N        1/1      54   484 ..     1   495 []   662.1 2.9e-195
Peptidase_S9   1/1     501   705 ..     1   229 []   163.6  3.2e-45

Alignments of top-scoring domains:
DPPIV_N: domain 1 of 1, from 54 to 484: score 662.1, E = 2.9e-195
                   *->SpDgkylLlatnyekiwRhSytasYyiyDletgkvtvepLppgdvee
                      SpD+ky+Lla+++++i+++S+tasY iy+++tg  +v++L+p+   e
   mKIAA1492    54    SPDLKYVLLAYDVKQIFHYSFTASYLIYNIHTG--EVWELNPP---E 95   

                   neegkiqyakwSPdaGnklAfVrdNNLYvkelatgdgketqiTsDGksng
                   +e++++qya w    G++l+++++NN+Y++++ ++  +++++Ts+Gk++ 
   mKIAA1492    96 VEDSVLQYAAWGVQ-GQQLIYIFENNIYYQPDIKS--SSLRLTSSGKEGI 142  

                   ifNGlpDWVYEEVEvfgrnsalWWSPDGsrLAflrfDeseVpeytlpyyg
                   ifNG++DW+YEE E ++++ a+WWSPDG+rLAfl++++s Vp++ +p+++
   mKIAA1492   143 IFNGIADWLYEE-ELLHSHIAHWWSPDGERLAFLMINDSLVPNMIIPRFT 191  

                   ddespppleqYPkvrsikfYPKAGapNPtVtLfvvdltdasgktilpmde
                   +        +YPk ++++ YPKAG++NP+V+L+vv+l   +++++l    
   mKIAA1492   192 GA-------LYPKAKQYP-YPKAGQANPSVKLYVVNL--YGPTHTL---- 227  

                   eivppddlsdanDyYitrVkWlvsdtkrllvqwlnRdQnvldlvlcdyDt
                   e++ppd ++++ +yYit+VkW vs+t+  +v+wlnR Qn+++l+lc  + 
   mKIAA1492   228 ELMPPDIFKSR-EYYITMVKW-VSNTR-TVVRWLNRPQNISILTLC--ES 272  

                   feskgrtvvlcpkpvehyeetsdgWvghrelhhsplfippnpalkrdggg
                    ++ g++ ++        e tsd+W++  +++++p+f+       rdg++
   mKIAA1492   273 -TT-GACSRKY-------EMTSDTWLS--KQNEEPVFS-------RDGSK 304  

                   flwisedrdGgrG.ykHLylydldgksspr.ivqlTsGnWeVtsgilgvD
                   f+ ++++++GgrG+++H++++ +++ks+ +++++lTsGnWeV+  il++D
   mKIAA1492   305 FFMTVPVKQGGRGeFHHIAMFLVQSKSEQItVRHLTSGNWEVIR-ILAYD 353  

                   ekrglvYFtAteyEdsgdPgerhLYsVslkstsggeptcLTcdsgdhrCt
                   e+++++YF++te   s  P +r+LYs+s++  + ++  c++c+  +++Ct
   mKIAA1492   354 ETTQKIYFLSTE--SS--PQGRQLYSASTE--GLLNRDCISCNFMKEDCT 397  

                   yysasFSpdgkyyvltysgPdtPpqvllntasgkvkgkelrtLedNdalk
                   y++asFSp  ++++l ++gP++P ++l+ t+++    ++   Le+N+++k
   mKIAA1492   398 YFDASFSPMNQHFLLFCEGPKVPVVSLHITDNP----SRYFLLENNSVMK 443  

                   eklkyAygyalPsvefgtikiFDeadGftdlnymlikPpdFdpalKKYPv
                   e+++   +++l + e++ ++i    d+++ l+ +l  P+dF ++ ++Y +
   mKIAA1492   444 ETIQ---KKKLAKRETRILHI----DDYE-LPLQLSFPKDFMEK-NQYAL 484  

                   <-*
                      
   mKIAA1492     -     -    

Peptidase_S9: domain 1 of 1, from 501 to 705: score 163.6, E = 3.2e-45
                   *->psfsvwnlqlladrGyvvavaniRGsggyGrawhdagkrdlgqnefd
                      ++++ w   l     ++va  ++RGsg++G +  + + r+ g +e +
   mKIAA1492   501    FHVD-WDSVLIDTDNVIVARFDGRGSGFQGLKVLQEIHRRIGSVEAK 546  

                   DfiaaaeyLieqgpyvDpdrlaiwGgSyGGyltgaalnkqrpdlFkaava
                   D++aa++yL++q  y+D+ rl i+G  yGGy + ++l      +Fk++  
   mKIAA1492   547 DQVAAVKYLLKQP-YIDSKRLSIFGKGYGGYIASMILK-SDEKFFKCGAV 594  

                   vvpvvDwltymsdtslpysfteaeymewgnpwdeneegYrylspyspydn
                   v+p++D+  y s       f e +y++ +     +e  Y++ s +++ + 
   mKIAA1492   595 VAPISDMKLYASA------FSE-RYLGMPSK---EESTYQASSVLHNIHG 634  

                   vkaqaypplLlihGlhDdRVpyqealklvaaLqalktGknpflllifpde
                   +k      lL+ihG++D+ V++q+++ l++ L+  k+G+n + l+++pde
   mKIAA1492   635 LK---EENLLIIHGTADTKVHFQHSAELIKHLI--KAGVN-YTLQVYPDE 678  

                   G.HdLSgggkprnkrlkeyarllaFllkvlggt<-*
                   G H      +++ k  + y ++l F+ ++l+ +   
   mKIAA1492   679 GyH-----ISDKSKH-HFYSTILRFFSDCLKEE    705  

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