hmmpfam - search a single seq against HMM database
HMMER 2.1.1 (Dec 1998)
Copyright (C) 1992-1998 Washington University School of Medicine
HMMER is freely distributed under the GNU General Public License (GPL).
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HMM file:                 /data11/genetics/InterProScan/iprscan/data/Pfam
Sequence file:            /cdna4/rodent/full/goal/mbh/mbh04401/w3open/interpro/cnk_1/seq.in
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Query:  mKIAA1468  ( 1194 res)   mbh04401

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
HEAT     HEAT repeat                                     77.5    2.8e-19   6

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
HEAT       1/6     535   571 ..     1    36 []     8.2       17
HEAT       2/6     574   610 ..     1    36 []    17.4     0.34
HEAT       3/6     613   650 ..     1    36 []    14.5      2.3
HEAT       4/6     654   686 ..     1    36 []     2.3  1.2e+02
HEAT       5/6     937   973 ..     1    36 []    11.0      7.1
HEAT       6/6     976  1012 ..     1    36 []    25.9  0.00093

Alignments of top-scoring domains:
HEAT: domain 1 of 6, from 535 to 571: score 8.2, E = 17
                   *->e.lldellplllkllnDpdpeVReaAaeaLgalaevl<-*
                       + +d+ll +l++l++ pd+e R++ +   +a+a+++   
   mKIAA1468   535    PkERDQLLHILFNLIKRPDDEQRQMILTGCVAFARHV    571  

HEAT: domain 2 of 6, from 574 to 610: score 17.4, E = 0.34
                   *->e.lldellplllkllnDpdpeVReaAaeaLgalaevl<-*
                       ++  ellp + + +n++ pe R+ +ae+ gala++l   
   mKIAA1468   574    TrVEAELLPQCWEQINHKYPERRLLVAESCGALAPYL    610  

HEAT: domain 3 of 6, from 613 to 650: score 14.5, E = 2.3
                   *->e.lldellplllklln.DpdpeVReaAaeaLgalaevl<-*
                      e   + +l +l+++l +D+ + VRea++++Lg ++ ++   
   mKIAA1468   613    EiRSSLVLSMLQQMLMeDKADLVREAVIKSLGIIMGYI    650  

HEAT: domain 4 of 6, from 654 to 686: score 2.3, E = 1.2e+02
                   *->e.lldellplllkllnDpdpeVReaAaeaLgalaevl<-*
                      ++++ + ++lll++l+Dp+++V  a+ +    +++ +   
   mKIAA1468   654    DkYQ-QGFELLLSALGDPSERVVSATHQ---VFLPAY    686  

HEAT: domain 5 of 6, from 937 to 973: score 11.0, E = 7.1
                   *->e.lldellplllkllnDpdpeVReaAaeaLgalaevl<-*
                        +++ ll +l  +  ++++ VR++Aa+ +  l++ +   
   mKIAA1468   937    PaYHELLLTVLWYGVVHTSALVRCTAARMFELLVKGV    973  

HEAT: domain 6 of 6, from 976 to 1012: score 25.9, E = 0.00093
                   *->e.lldellplllkllnDpdpeVReaAaeaLgalaevl<-*
                        + ++++p+l++l +Dp+ +VR a++ a+g+++e +   
   mKIAA1468   976    TlVAQRVVPALITLSSDPEISVRIATIPAFGTIMETV    1012 

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