hmmpfam - search a single seq against HMM database
HMMER 2.1.1 (Dec 1998)
Copyright (C) 1992-1998 Washington University School of Medicine
HMMER is freely distributed under the GNU General Public License (GPL).
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
HMM file:                 /data11/genetics/InterProScan/iprscan/data/smart.HMMs
Sequence file:            /cdna4/rodent/full/goal/mbg/mbg12977/w3open/interpro/cnk_1/seq.in
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
Query:  mKIAA1464  ( 613 res)   mbg12977

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
SPRY     Domain in SPla and the RYanodine Receptor.     161.4    9.3e-44   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
SPRY       1/1      93   214 ..     1   145 []   161.4  9.3e-44

Alignments of top-scoring domains:
SPRY: domain 1 of 1, from 93 to 214: score 161.4, E = 9.3e-44
                   *->sGkhYfEVevdtggdkghwrvGvatksvhlypfkvrrkrkggvsllG
                      +G++YfEV++ ++g++g++++G++ ++v+             ++l+G
   mKIAA1464    93    CGIYYFEVKIVSKGRDGYMGIGLSAQGVN------------MNRLPG 127  

                   edkgSwgyrgdggkkyhasefgeeyglpfqepgDviGcflDleaggStis
                   +dk+S+gy+gd+g+ ++ s +g +yg++f++ gDviGc+++l +g  t +
   mKIAA1464   128 WDKHSYGYHGDDGHSFCSSGTGQPYGPTFTT-GDVIGCCVNLING--TCF 174  

                   FykNGkyLgdshilaffdvtfsgpLyPavslgstdgGgesvrlnfGp.p<
                   ++kNG++Lg    +af d++++  LyP+v+l+ +   ge+v  nfG++p 
   mKIAA1464   175 YTKNGHSLG----IAFTDLPAN--LYPTVGLQTP---GEIVDANFGQqP  214  

                   -*
                     
   mKIAA1464     -    -    

//