hmmpfam - search a single seq against HMM database
HMMER 2.1.1 (Dec 1998)
Copyright (C) 1992-1998 Washington University School of Medicine
HMMER is freely distributed under the GNU General Public License (GPL).
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HMM file:                 /data11/genetics/InterProScan/iprscan/data/Pfam
Sequence file:            /cdna4/rodent/full/goal/mbg/mbg00760/w3open/interpro/cnk_1/seq.in
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Query:  mKIAA1463  ( 961 res)   mbg00760

Scores for sequence family classification (score includes all domains):
Model       Description                                 Score    E-value  N 
--------    -----------                                 -----    ------- ---
AMP-binding AMP-binding enzyme                          149.6    5.3e-41   1

Parsed for domains:
Model       Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
--------    ------- ----- -----    ----- -----      -----  -------
AMP-binding   1/1     407   880 ..     1   377 []   149.6  5.3e-41

Alignments of top-scoring domains:
AMP-binding: domain 1 of 1, from 407 to 880: score 149.6, E = 5.3e-41
                   *->TYrELderanrlAaaLr.alGvgpGdrVaillpnspelvvailAvlk
                      +  +L+ ra+r+A++L ++  + +Gd V +l p ++el++a++++l 
   mKIAA1463   407    SCLQLHKRAERIASVLGdKGHLNAGDNVVLLYPPGIELIAAFYGCLY 453  

                   aGaayvPldpsypa......erlayiledsgakvlltddalla.l.....
                   aG+++v++ p + ++ + +   ++ +++ s+a+++lt+  l + l++ ++
   mKIAA1463   454 AGCIPVTVRPPHAQnltatlPTVRMVVDVSKAACVLTTQTLMRlLksrea 503  

                   .....................s.e.p.ppvdpddlAyiiYTSGTTGkPKG
                   ++++++++ ++  ++++ + +  +++  p++p+ lAy+ ++  TTG+  G
   mKIAA1463   504 aaavdvktwpaiidtddlprkRlPqLyKPPTPEMLAYLDFSVSTTGMLTG 553  

                   VmltHrnlvnlvaala.rf.l.pddaervllllppllhfdgsvweifgpL
                   V ++H ++ +l++a+  +++l      r ++   ++++  g+ ++ ++++
   mKIAA1463   554 VKMSHSAVNALCRAIKlQCeLySS---RQIAICLDPYCGLGFALWCLCSV 600  

                   laGatlvlvpkfdryrdpealldliekykvTvlflvPtllrlllkape..
                   ++G++ vl+p+ ++  +  ++l+++++yk+  +f+  ++++l+ k   ++
   mKIAA1463   601 YSGHQSVLIPPMELENNLFLWLATVNQYKIRDTFCSYSVMELCTKGLGnq 650  

                   ........edlssLrlvlsgGealpp.elarrlrerfgs...........
                    +  ++++ +ls +r++++++e  p+ +l + + ++f++ + +++  +++
   mKIAA1463   651 vevlktrgINLSCIRTCVVVAEERPRvSLQQSFSKLFKDiglspravstt 700  

                   ......ggvrlvngYGpTEttvvatanppg.p..............pgsi
                    +++ ++++ l  + Gp  ttv +    +++++ +  +++ + +   +  
   mKIAA1463   701 fgsrvnVAICLQGTSGPDPTTVYVDLKSLRhDrvrlvergapqsllLSES 750  

                   GrPlpgvevyvlDeeg.qpvppGvvGELyirGwpgvarGYlnrPelTaer
                   G+ lpgv+v+++++e++ pv++   GE+++ + p+ a GY+   +   e+
   mKIAA1463   751 GKILPGVKVVIVNPETkGPVGDSHLGEIWVNS-PHTASGYYTIYD--SET 797  

                   Fvadgwgp........GeRmYrTGDlgrwdpD..........GyleilGR
                     ad ++ + + ++  ++ + rTG lg ++  + +  +++++  l+++G 
   mKIAA1463   798 LQADHFNTrlsfgdaaQTLWARTGYLGFVRRTeltaatgerhDALYVVGA 847  

                   kDdqvKirGerIepgEiEavLl.ahPgVaeAaV<-*
                   +D+   +rG r  p +iE+ +++ h  +ae+aV   
   mKIAA1463   848 LDETLELRGLRYHPIDIETSVSrVHRSIAECAV    880  

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