hmmpfam - search a single seq against HMM database
HMMER 2.1.1 (Dec 1998)
Copyright (C) 1992-1998 Washington University School of Medicine
HMMER is freely distributed under the GNU General Public License (GPL).
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HMM file:                 /data11/genetics/InterProScan/iprscan/data/Pfam
Sequence file:            /cdna4/rodent/full/goal/mbp/mbp02158/w3open/interpro/cnk_1/seq.in
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Query:  mKIAA1456  ( 416 res)   mbp02158

Scores for sequence family classification (score includes all domains):
Model           Description                             Score    E-value  N 
--------        -----------                             -----    ------- ---
Methyltransf_11 Methyltransferase domain                 88.1    1.8e-22   1
Methyltransf_12 Methyltransferase domain                 45.6    1.1e-09   1

Parsed for domains:
Model           Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
--------        ------- ----- -----    ----- -----      -----  -------
Methyltransf_12   1/1      21   106 ..     1   100 []    45.6  1.1e-09
Methyltransf_11   1/1      13   108 ..     1    99 []    88.1  1.8e-22

Alignments of top-scoring domains:
Methyltransf_12: domain 1 of 1, from 21 to 106: score 45.6, E = 1.1e-09
                   *->LdiGcGtGrllaalleallnpgaeytgvDiSp.aleiaaaaerladl
                         GcGtG      l+   n +++ +g+D+  +++e  +a++r  ++
   mKIAA1456    21    ---GCGTG----KYLKV--NSQVHTLGCDYCGpLVE--IARNR--GC 54   

                   gl.va.rvrldvldlidedpsfDvvvafnvLhhl.dpedpravLrnlrrl
                   +  v+++++l+++d       fD++++++v+hh+++ e + +++++++r+
   mKIAA1456    55 EVmVCdNLNLPFRDQ-----GFDAIISIGVIHHFsTKERRIRAIKEMARV 99   

                   LkPGGvl<-*
                   L+PGG l   
   mKIAA1456   100 LAPGGQL    106  

Methyltransf_11: domain 1 of 1, from 13 to 108: score 88.1, E = 1.8e-22
                   *->LDvG.....cGtGllaraLarrvgpgarvtGvDlspemlalArerap
                       D+G + ++cGtG++++  ++      +  G+D++ + +++Ar r+ 
   mKIAA1456    13    CDAGfsltgCGTGKYLKVNSQV-----HTLGCDYCGPLVEIARNRGC 54   

                   eaglenfvvgDaedLPfpDesFDlVvssevlhhl..aedperalrEiaRV
                   e     ++v+D  +LPf+D  FD+++s++v+hh++++e++ ra++E+aRV
   mKIAA1456    55 E-----VMVCDNLNLPFRDQGFDAIISIGVIHHFstKERRIRAIKEMARV 99   

                   LKPGGklvi<-*
                   L PGG l i   
   mKIAA1456   100 LAPGGQLMI    108  

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