hmmpfam - search a single seq against HMM database
HMMER 2.1.1 (Dec 1998)
Copyright (C) 1992-1998 Washington University School of Medicine
HMMER is freely distributed under the GNU General Public License (GPL).
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HMM file:                 /data11/genetics/InterProScan/iprscan/data/Pfam
Sequence file:            /cdna4/rodent/full/goal/mth/mth01486/w3open/interpro/cnk_1/seq.in
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Query:  mKIAA1451  ( 429 res)   mth01486

Scores for sequence family classification (score includes all domains):
Model        Description                                Score    E-value  N 
--------     -----------                                -----    ------- ---
Oxysterol_BP Oxysterol-binding protein                   20.6    2.3e-09   1

Parsed for domains:
Model        Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
--------     ------- ----- -----    ----- -----      -----  -------
Oxysterol_BP   1/1       1   325 [.     1   440 []    20.6  2.3e-09

Alignments of top-scoring domains:
Oxysterol_BP: domain 1 of 1, from 1 to 325: score 20.6, E = 2.3e-09
                   *->kSqhsSsssltsklkfilsepkdltrRldipeeslspisLwsisqlw
                                               r                     
   mKIAA1451     1    -------------------------R--------------------- 1    

                   vGkdLskitlPvfinEpkSmLqrvtedleYpelLdkAaaredsltrWfly
                                                              l++    
   mKIAA1451     2 -------------------------------------------LKK---- 4    

                   vaastlssysettrrvkKPlNPlLGEtFelkrendElp..nkgqyrllsE
                   v++++ls++  +++ +kKP NP+LGEtF   +    +p++n   +++++E
   mKIAA1451     5 VVKWYLSGFYKKPKGLKKPYNPILGETFRCLWI---HPrtN-SKTFYIAE 50   

                   QVSHHPPvsAffaespkskwrvqgevqikskFlGkslavmkeGltvhtil
                   QVSHHPP+sAf+  + k    ++g +  kskF G+sl++  eG   ++ +
   mKIAA1451    51 QVSHHPPISAFYVSNRKDGFCLSGSILAKSKFYGNSLSAILEGE-ARLTF 99   

                   dikdingkpEtYtwtqPnttveGILvGkpfvElSGdesvinsstGdkcvI
                      +     E Y++t P  + +GIL G +  El G + ++  +tG+ + +
   mKIAA1451   100 LNRG-----EDYVMTMPYAHCKGILYGTMTLELGGTVNITCQKTGYSAIL 144  

                   eFktkGyf..SGkkdsfkgrivkdpdgnkdKEkklytlsGkWndsmyikK
                   eFk k + ++S  ++++ g+ +   ++      +l tl G+W+  + i +
   mKIAA1451   145 EFKLKPFLgsSDYVNQISGKLK-LGKE------VLATLEGHWDSEVFIND 187  

                   vqsksegelfl....DahktphealkvrpLeeqhelesrkaWkkvadalk
                   ++    +e f ++++D  +    +  v + eeq ++es k+W  v++a+ 
   mKIAA1451   188 KKT-DNSEIFWnptpDIKQWRLIRHTV-KFEEQDDFESEKLWQRVTKAIN 235  

                   vgnltvftktkneleerqRpllkptesrgvedqralfkrledkedldkee
                   + + t +t++k  lee qR+ ++ ++ +  e+  +lf+ l++     + e
   mKIAA1451   236 AKDQTEATQEKYVLEEAQRQAARDRKTKTQEWVCKLFE-LDPL----TGE 280  

                   kkekpeaddkerkqkgslyepkwfvpsgqpvtdKeklyikarkeyWefrK
                   +  k +++ +       l+    f++ g+  t  + +  +   +  + + 
   mKIAA1451   281 WHYKFSDTRP----WDPLNDMIQFEKDGVIQT--KVKHRTPMVSVPKMKH 324  

                   k<-*
                   k   
   mKIAA1451   325 K    325  

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