hmmpfam - search a single seq against HMM database
HMMER 2.1.1 (Dec 1998)
Copyright (C) 1992-1998 Washington University School of Medicine
HMMER is freely distributed under the GNU General Public License (GPL).
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HMM file:                 /data11/genetics/InterProScan/iprscan/data/smart.HMMs
Sequence file:            /cdna4/rodent/full/goal/mbg/mbg18603/w3open/interpro/cnk_1/seq.in
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Query:  mKIAA1439  ( 439 res)   mbg18603

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
DWA      Domain A in dwarfin family proteins             86.6      3e-21   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
DWA        1/1      59   167 ..     1   124 []    86.6    3e-21

Alignments of top-scoring domains:
DWA: domain 1 of 1, from 59 to 167: score 86.6, E = 3e-21
                   *->eeekwakkavesLvKkLKkkNkqqLeeLlqAVeSkgkpptrCvtipr
                      +++kwa++++ +L+K++  +    +e+++  V++k  p   Cv+++ 
   mKIAA1439    59    VKQKWASRLLAKLRKDIRPE---YREDFVLTVTGKKPP--CCVLSN- 99   

                   eRslDgRlqvsdpl.QadrkglPhVlycRLfRWPDLqsddkhELKalptC
                    ++++g+++++d+l+Qad+++++++++++Lf+ ++L+s+d+++L + p+C
   mKIAA1439   100 -PDQKGKMRRIDCLrQADKVWRLDLVMVILFKGIPLESTDGERLVKSPQC 148  

                   qyafesksnpegevCcNPYHYsrverpe<-*
                     ++         +C+ P+H+ +++ +    
   mKIAA1439   149 SNPG---------LCVQPHHIGVSVKEL    167  

//