hmmpfam - search a single seq against HMM database
HMMER 2.1.1 (Dec 1998)
Copyright (C) 1992-1998 Washington University School of Medicine
HMMER is freely distributed under the GNU General Public License (GPL).
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HMM file:                 /data11/genetics/InterProScan/iprscan/data/Pfam
Sequence file:            /cdna4/rodent/full/goal/mth/mth00831/w3open/interpro/cnk_1/seq.in
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Query:  mKIAA1432  ( 1363 res)   mth00831

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
DUF1339  Protein of unknown function (DUF1339)          700.6   7.5e-207   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
DUF1339    1/1     671   944 ..     1   322 []   700.6 7.5e-207

Alignments of top-scoring domains:
DUF1339: domain 1 of 1, from 671 to 944: score 700.6, E = 7.5e-207
                   *->thLvEeaLWLdcGarGMkGCPAPKCLTVTLYLIPVWlPllPddreRR
                      +hL+ eaLWL+cG++GMk                VWlPl+P+d+   
   mKIAA1432   671    RHLL-EALWLSCGGAGMK----------------VWLPLFPRDH--- 697  

                   EGEqGlArkehsFlskRImLpFdleiYPLvvLfndglVlGVveqrlsfsA
                          rk+hsFls+RImLpF+++iYPL+vLf+d+lVlG+v+++l++++
   mKIAA1432   698 -------RKPHSFLSQRIMLPFHINIYPLAVLFEDALVLGAVNDTLLYDS 740  

                   sasRNqarmEqlavfelPFaVleRqSQiyLHhlLRQLLkRNLGeeALlLA
                   +++R  ar Eql+v+ +PF+V+eR+SQiyLHh+LRQLL+RNLGe+ALlLA
   mKIAA1432   741 LYTRSSAR-EQLEVL-FPFCVVERTSQIYLHHILRQLLVRNLGEQALLLA 788  

                   QsCasLPyFpHaLELLLHeVLEEEaTSkePIPDQISGPGHLKKLpLLPkv
                   QsCa LPyFpH+LEL+LHeVLEEEaTS+ePIPD           pLLP+v
   mKIAA1432   789 QSCAALPYFPHVLELMLHEVLEEEATSREPIPD-----------PLLPTV 827  

                   vdFIkeFPeyLdtVVhcARKTElALWayLFsaaGkPkdLFEeCLQrrqLd
                   ++FI+eFP++L+tVVhcARKTE+ALW+yLF+a+G+PkdLFEeCL++++Ld
   mKIAA1432   828 AKFITEFPLFLQTVVHCARKTEYALWNYLFAAVGNPKDLFEECLMAQDLD 877  

                   TAASYlIvLqnLEgvaVSkqcAtrLlqaALeekKWdLAkelvRFLkaIGs
                   TAASYlI+Lqn+E++aVS+q+At+L+++ALe++KWdL+++++RFLkaIGs
   mKIAA1432   878 TAASYLIILQNMEVPAVSRQHATLLFNTALEQGKWDLCRHMIRFLKAIGS 927  

                   deidaPtssdslspKllPppqvksS<-*
                   +e+++P+s+        P+ q++sS   
   mKIAA1432   928 GESETPPST--------PTSQEPSS    944  

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