hmmpfam - search a single seq against HMM database
HMMER 2.1.1 (Dec 1998)
Copyright (C) 1992-1998 Washington University School of Medicine
HMMER is freely distributed under the GNU General Public License (GPL).
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HMM file:                 /data11/genetics/InterProScan/iprscan/data/smart.HMMs
Sequence file:            /cdna4/rodent/full/goal/mbg/mbg18863/w3open/interpro/cnk_1/seq.in
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Query:  mKIAA1427  ( 443 res)   mbg18863

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
C2       Protein kinase C conserved region 2 (CalB)      61.1    1.5e-13   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
C2         1/1     320   436 ..     1    92 []    61.1  1.5e-13

Alignments of top-scoring domains:
C2: domain 1 of 1, from 320 to 436: score 61.1, E = 1.5e-13
                   *->tLtvkiisArnLp..........DPYVkvs...........kTkvvk
                      +L v +i+A+nL ++ ++   ++D  Vkv+ +++ ++ ++++Tk  k
   mKIAA1427   320    RLLVVLIKAKNLHsnqskellgkDVSVKVTlkhqaqklkkkQTKRAK 366  

                   ktlsgfNPvWnEesetFeFevpp.....s.LeieVyDk......dfiGrv
                   +     NPvWnE   +++Fe+p++  + s++e+eV   ++++++  +G++
   mKIAA1427   367 HKI---NPVWNE---MIMFELPDdllraSsVELEVLGQgeegpsCELGHC 410  

                   tippnnahqhsadg..lihlsell.ggrh.kl<-*
                   +++ +      a+g++++h++e+l+++r++     
   mKIAA1427   411 SLGLH------ASGseRSHWEEMLkNPRRqIA    436  

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