hmmpfam - search a single seq against HMM database
HMMER 2.1.1 (Dec 1998)
Copyright (C) 1992-1998 Washington University School of Medicine
HMMER is freely distributed under the GNU General Public License (GPL).
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HMM file:                 /data11/genetics/InterProScan/iprscan/data/Pfam
Sequence file:            /cdna4/rodent/full/goal/mbk/mbk00922/w3open/interpro/cnk_1/seq.in
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Query:  mKIAA1425  ( 485 res)   mbk00922

Scores for sequence family classification (score includes all domains):
Model           Description                             Score    E-value  N 
--------        -----------                             -----    ------- ---
DMAP1           DNA methyltransferase 1-associated pr   418.8   4.9e-122   1
Myb_DNA-binding Myb-like DNA-binding domain              16.7       0.37   1

Parsed for domains:
Model           Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
--------        ------- ----- -----    ----- -----      -----  -------
Myb_DNA-binding   1/1     166   216 ..     1    65 []    16.7     0.37
DMAP1             1/1     260   424 ..     1   181 []   418.8 4.9e-122

Alignments of top-scoring domains:
Myb_DNA-binding: domain 1 of 1, from 166 to 216: score 16.7, E = 0.37
                   *->rgrWtaeEdellveavekhGkgfg.IrlsltkanWkkIaeklgpgss
                       + Wt+ E++ l+++ +++  +f  I     +++ ++  ++++    
   mKIAA1425   166    DDAWTKAETDHLFDLSRRFDLRFVvI-----HDRYDH--QQFK---- 201  

                   nnvlgrtaeqcklryykyk<-*
                        r++e++k+ryy +    
   mKIAA1425   202 ----KRSVEDLKERYYHIC    216  

DMAP1: domain 1 of 1, from 260 to 424: score 418.8, E = 4.9e-122
                   *->EEedLlaELrkIEaRKKEREkkaqDLQKLIsaadQQpEHASptAegr
                      EEe+Ll+ELrkIEaRKKEREk++qDLQKLI+aad       +tAe+r
   mKIAA1425   260    EEEYLLQELRKIEARKKEREKRSQDLQKLITAAD-------TTAEQR 299  

                   kgekkakkKkvfqkkeasksttattaFNPldIsvtgikFsdfkSSGvsLR
                   ++e+ka+kKk++qkkea+k+++++ta         gikF+dfkS+Gv+LR
   mKIAA1425   300 RTERKAPKKKLPQKKEAEKPAVPETA---------GIKFPDFKSAGVTLR 340  

                   sQrMKLPtniGQkKvKaLEqvLeelkvelaPvptEeivktFNeLRSdlvL
                   sQrMKLP+++GQkK+KaLEq+L+el+vel+P+ptEe+v++FNeLRSdlvL
   mKIAA1425   341 SQRMKLPSSVGQKKIKALEQMLLELGVELSPTPTEELVHMFNELRSDLVL 390  

                   lqELksAlatceYELesLrhryealarGkdLdip<-*
                   l+ELk+A+a+ceYEL++Lrhr+ealar+++L++p   
   mKIAA1425   391 LYELKQACANCEYELQMLRHRHEALARAGVLGAP    424  

//