hmmpfam - search a single seq against HMM database
HMMER 2.1.1 (Dec 1998)
Copyright (C) 1992-1998 Washington University School of Medicine
HMMER is freely distributed under the GNU General Public License (GPL).
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HMM file:                 /data11/genetics/InterProScan/iprscan/data/Pfam
Sequence file:            /cdna4/rodent/full/goal/mbp/mbp08200/w3open/interpro/cnk_1/seq.in
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Query:  mKIAA1414  ( 1305 res)   mbp08200

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
HEAT     HEAT repeat                                     59.8    5.7e-14   7

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
HEAT       1/7      50    85 ..     1    36 []    19.3    0.089
HEAT       2/7      90   126 ..     1    36 []     8.9       14
HEAT       3/7     318   353 ..     1    36 []    10.6      7.9
HEAT       4/7     782   819 ..     1    36 []     8.1       18
HEAT       5/7     875   911 ..     1    36 []     3.0       92
HEAT       6/7     914   950 ..     1    36 []    18.0     0.23
HEAT       7/7    1142  1178 ..     1    36 []    10.0      9.8

Alignments of top-scoring domains:
HEAT: domain 1 of 7, from 50 to 85: score 19.3, E = 0.089
                   *->e.lldellplllkllnDpdpeVReaAaeaLgalaevl<-*
                      ++++ ++     +ll+D +  VR+a+a++L +l + +   
   mKIAA1414    50    SsHR-DIYKNARSLLTDRSMAVRCAVAKCLLELQNEA    85   

HEAT: domain 2 of 7, from 90 to 126: score 8.9, E = 14
                   *->e.lldellplllkllnDpdpeVReaAaeaLgalaevl<-*
                         l+++  l++k+l+ +++ VR a+ + Lg+++  +   
   mKIAA1414    90    TaELENVATLCFKALENSNYGVRVAVSKLLGTVMATA    126  

HEAT: domain 3 of 7, from 318 to 353: score 10.6, E = 7.9
                   *->e.lldellplllkllnDpdpeVReaAaeaLgalaevl<-*
                      e  +  ll+++ + l +p+   R+aAa++L  +a  l   
   mKIAA1414   318    EaSI-GLLEIVTSVLLHPSMAARLAAAWCLRCVAVAL    353  

HEAT: domain 4 of 7, from 782 to 819: score 8.1, E = 18
                   *->e.lldellplllkllnDp.dpeVReaAaeaLgalaevl<-*
                       ++l++ + +ll l++D ++peV+  ++ +L+ +++     
   mKIAA1414   782    GqHLKTSVSILLALAQDGtSPEVQTWSLHSLALIVDSS    819  

HEAT: domain 5 of 7, from 875 to 911: score 3.0, E = 92
                   *->e.lldellplllkllnDpdpeVReaAaeaLgalaevl<-*
                      ++++++ l  +    +++d+ V++aA+++L++l  ++   
   mKIAA1414   875    StIRSSCLVGCAITQDHSDSLVQAAAISCLQQLHMFA    911  

HEAT: domain 6 of 7, from 914 to 950: score 18.0, E = 0.23
                   *->e.lldellplllkllnDpdpeVReaAaeaLgalaevl<-*
                         l++l+p l+ +l++++   R+aA+ +L +la+     
   mKIAA1414   914    HvNLSSLVPSLCVHLCSSHLLLRRAAVACLRQLAQRE    950  

HEAT: domain 7 of 7, from 1142 to 1178: score 10.0, E = 9.8
                   *->e.lldellplllkllnDpdpeVReaAaeaLgalaevl<-*
                        +l+ l+ + + +++D +   R+a ++aL ++++++   
   mKIAA1414  1142    VlHLSGLIRMAFMAATDHSNQLRMAGLQALEDIIKKF    1178 

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