hmmpfam - search a single seq against HMM database
HMMER 2.1.1 (Dec 1998)
Copyright (C) 1992-1998 Washington University School of Medicine
HMMER is freely distributed under the GNU General Public License (GPL).
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HMM file:                 /data11/genetics/InterProScan/iprscan/data/Pfam
Sequence file:            /cdna4/rodent/full/goal/mbr/mbr07151/w3open/interpro/cnk_1/seq.in
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Query:  mKIAA1393  ( 410 res)   mbr07151

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
Met_10   Met-10+ like-protein                           281.2    1.3e-80   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
Met_10     1/1     114   337 ..     1   260 []   281.2  1.3e-80

Alignments of top-scoring domains:
Met_10: domain 1 of 1, from 114 to 337: score 281.2, E = 1.3e-80
                   *->ssfdiIGDivilnipdElqpyrkvIgEaildktkkvKtVlrkggiVt
                      s+f ++G+i++ln++d   p++++Ig++  dk++++ + ++k+++++
   mKIAA1393   114    SGFSRVGHIAHLNLRDHQLPFKHLIGQVMVDKNPGITSAVNKTSNID 160  

                   GeyRtrrlEvlAGedrteTiHkEnGcrFKlDvsKVYfSprLsgEReRiak
                   + yR++++Evl Ge+++ T ++En++++++D+sKVY++prLs+E+ Ri  
   mKIAA1393   161 NTYRNFQMEVLCGEENMLTKVRENNYTYEFDFSKVYWNPRLSTEHGRITE 210  

                   lYvkeGEvVvDMFAGiGPFsIPiAkhsKakrVyAvdlNPeavKyLkeNIk
                   l  ++G+v +D+FAG+GPF+IP+A+  K   V+A+dlNPe+ K+L  N  
   mKIAA1393   211 L-LNPGDVLFDVFAGVGPFAIPAAR--KNCTVFANDLNPESHKWLLHNCQ 257  

                   LNKDKVegvIkpIlgDvrdVipqsenvADdvvrlekeGkivlilPkkkrr
                   LN  KV +++k++++D++d+i    +v     +l++     l +  k++ 
   mKIAA1393   258 LN--KVDQKVKVFNMDGKDFIQ--GPVRE---ELMLR--LGLSAEAKPS- 297  

                   akkapkpeekevdiPssisRViMnlPksAheFLdkFRGAlr...avkdgi
                                     ++++MnlP++A+eFL  FR +l++++++++  
   mKIAA1393   298 ------------------VHIVMNLPAKAIEFLSVFRSLLDgqpCSTEL- 328  

                   eavdldklpkvgViHY<-*
                          lp v+ +++   
   mKIAA1393   329 -------LPTVHCYCF    337  

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