hmmpfam - search a single seq against HMM database
HMMER 2.1.1 (Dec 1998)
Copyright (C) 1992-1998 Washington University School of Medicine
HMMER is freely distributed under the GNU General Public License (GPL).
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HMM file:                 /data11/genetics/InterProScan/iprscan/data/Pfam
Sequence file:            /cdna4/rodent/full/goal/mph/mph00154/w3open/interpro/cnk_1/seq.in
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Query:  mKIAA1387  ( 865 res)   mph00154

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
DUF625   Protein of unknown function (DUF625)           474.3   9.7e-139   1
WH1      WH1 domain                                     -14.7       0.21   1
Ran_BP1  RanBP1 domain                                  -58.7       0.39   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
WH1        1/1      42   146 ..     1   117 []   -14.7     0.21
Ran_BP1    1/1      50   148 ..     1   127 []   -58.7     0.39
DUF625     1/1     211   404 ..     1   210 []   474.3 9.7e-139

Alignments of top-scoring domains:
WH1: domain 1 of 1, from 42 to 146: score -14.7, E = 0.21
                   *->LgEqkiftlraaVvqlydankrdkehWikagtgPqafavcfvyDnpq
                       +E+    +r  V ++   + r   +W  +gtg   ++  +v  + +
   mKIAA1387    42    -PEATMSDTRRRVKVYTLNEDR---QWDDRGTG--HVSSTYVEELKG 82   

                   nSyflRivgikgqrDqkviwnqeiypnleYnqarpfFhtfaDegadcvyG
                    S + R+ +  ++    ++ ++ i pn  Y +   ++  ++ e ++   +
   mKIAA1387    83 MSLLVRAES--DG---SLLLESKINPNTAYQKQQDTLIVWS-EAENYDLA 126  

                   LnFaseeEAtkFakavqeal<-*
                   L F  ++ ++   ++   +    
   mKIAA1387   127 LSFQEKAGCDEIWEKICQVQ    146  

Ran_BP1: domain 1 of 1, from 50 to 148: score -58.7, E = 0.39
                   *->EVktGEEDEevLFsqRAKLfRFdaevdlkeWKERGvGdiKILKnkdd
                                     R+K ++++ +    +W+ RG+G +     ++ 
   mKIAA1387    50    -------------RRRVKVYTLNEDR---QWDDRGTGHVSSTYVEEL 80   

                   vgkvRiLMRRDqvLKVcANhyItptmtLQkPlaGSdrswvwtataDfaDg
                    +   +L R +  + +++   I p   +Qk     d   vw         
   mKIAA1387    81 -KGMSLLVRAESDGSLLLESKINPNTAYQKQQ---DTLIVW--------S 118  

                   eaKpeqlAirFKtkEeAdeFKkkFEeaqke<-*
                   ea+   lA  F  k   de  +k+   q +   
   mKIAA1387   119 EAENYDLALSFQEKAGCDEIWEKICQVQGK    148  

DUF625: domain 1 of 1, from 211 to 404: score 474.3, E = 9.7e-139
                   *->LknenYIdkLielFhlCEdlentdGLHmLfnIiKgiilLNkaqlLEs
                      L+ne+YI+kL++lF++CE+lent+GLH+L++Ii+gi++LNka+l+E+
   mKIAA1387   211    LENEGYIKKLLQLFQACENLENTEGLHHLYEIIRGILFLNKATLFEV 257  

                   mfsnDelIMdivGcLEYDPevPqsKAnHReyLGkksvkFKEvIPIkdpdl
                   mfs De+IMd+vGcLEYDP+++q+K +HRe+L +k++kFKEvIPI+d++l
   mKIAA1387   258 MFS-DECIMDVVGCLEYDPALAQPK-RHREFL-TKTAKFKEVIPITDSEL 304  

                   laKIHQTfRlqYLkDVVLpTPrVlvDdaifstLsSfIffNkaeIvslLQd
                   ++KIHQT+R+qY++D++LpTP+V+ +++++stL+SfIffNk+eIvs+LQ+
   mKIAA1387   305 RQKIHQTYRVQYIQDIILPTPSVF-EENFLSTLTSFIFFNKVEIVSMLQE 353  

                   dekfDRLqElFDArlrdestsdKEKFVqkRkdlVffLqefcnisknLQpq
                   dekf  L+E+F A+l+de+t+d     +kR++lV+f++efc++s++LQpq
   mKIAA1387   354 DEKF--LSEVF-AQLTDEATDD-----DKRRELVNFFKEFCAFSQTLQPQ 395  

                   sfCnsrsaffKtL<-*
                   +    r+affKtL   
   mKIAA1387   396 N----RDAFFKTL    404  

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