hmmpfam - search a single seq against HMM database
HMMER 2.1.1 (Dec 1998)
Copyright (C) 1992-1998 Washington University School of Medicine
HMMER is freely distributed under the GNU General Public License (GPL).
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HMM file:                 /data11/genetics/InterProScan/iprscan/data/smart.HMMs
Sequence file:            /cdna4/rodent/full/goal/mbg/mbg07509/w3open/interpro/cnk_1/seq.in
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Query:  mKIAA1386  ( 1087 res)   mbg07509

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
ANK      ankyrin repeats                                 51.0    1.5e-10   2

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
ANK        1/2      47    77 ..     1    30 []    18.1      1.3
ANK        2/2     147   176 ..     1    30 []    33.0    4e-05

Alignments of top-scoring domains:
ANK: domain 1 of 2, from 47 to 77: score 18.1, E = 1.3
                   *->dGrTpLHlAaengnlevvklLldkga.dina<-*
                      + +TpLH+Aa++g   ++  +l    +++n+   
   mKIAA1386    47    QHNTPLHYAARHGMNRILGTFLFGRDgNPNK    77   

ANK: domain 2 of 2, from 147 to 176: score 33.0, E = 4e-05
                   *->dGrTpLHlAaengnlevvklLldkgadina<-*
                        +TpLH+Aa++g + +v+lL+++g+d+ a   
   mKIAA1386   147    KKNTPLHYAAASGMKACVELLVKHGGDLFA    176  

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