hmmpfam - search a single seq against HMM database
HMMER 2.1.1 (Dec 1998)
Copyright (C) 1992-1998 Washington University School of Medicine
HMMER is freely distributed under the GNU General Public License (GPL).
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HMM file:                 /data11/genetics/InterProScan/iprscan/data/Pfam
Sequence file:            /cdna4/rodent/full/goal/mbh/mbh01630/w3open/interpro/cnk_1/seq.in
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Query:  mKIAA1376  ( 453 res)   mbh01630

Scores for sequence family classification (score includes all domains):
Model      Description                                  Score    E-value  N 
--------   -----------                                  -----    ------- ---
Arrestin_N Arrestin (or S-antigen), N-terminal domain   206.5    4.1e-58   1
Arrestin_C Arrestin (or S-antigen), C-terminal domain   139.5    6.1e-38   1

Parsed for domains:
Model      Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
--------   ------- ----- -----    ----- -----      -----  -------
Arrestin_N   1/1      48   204 ..     1   172 []   206.5  4.1e-58
Arrestin_C   1/1     226   353 ..     1   172 []   139.5  6.1e-38

Alignments of top-scoring domains:
Arrestin_N: domain 1 of 1, from 48 to 204: score 206.5, E = 4.1e-58
                   *->feiyld...akpdpvYhpGlVetvsGrVllDetkepikvravkitlk
                      ++i +d  ++   pvY++G  +tvsGrV+l e++ +i+v+++ki+++
   mKIAA1376    48    LTISFDclnDSNVPVYSSG--DTVSGRVNL-EVTGEIRVKSLKIHAR 91   

                   GkartgWee.evrgrtfrkdlygeeeqvyptvnysgkveYldtqtrLwgk
                   G a+++W+e++++g+ + +           t+ny+++veY++++++L+g+
   mKIAA1376    92 GHAKVRWTEsRNAGSNTAY-----------TQNYTEEVEYFNHKDILIGH 130  

                   edg.......vntLpaGthefPFsfeLPpncLPsSfeGqhGPDqGKpCgI
                   e  +++++++++t+++G+he+ FsfeLP+ +L++SfeG+hG       ++
   mKIAA1376   131 ERDddnseegFHTIHSGRHEYAFSFELPQTPLATSFEGRHG-------SV 173  

                   rYevKaelaestdRPrwkfdhkrkkvftVirkldln<-*
                   rY+vKael    +RP w +++k kk+ftV++++d+n   
   mKIAA1376   174 RYWVKAEL----HRP-WLLPVKLKKEFTVFEHIDIN    204  

Arrestin_C: domain 1 of 1, from 226 to 353: score 139.5, E = 6.1e-38
                   *->sdgpltlevslpkkgYvpGEkIpvtvkidNnSsktvkkikasLvQhv
                      ++gp++l++ +++kgY+pGE I+++++i+N+Ss ++  +ka ++Q+ 
   mKIAA1376   226    TSGPISLSAKIERKGYTPGESIQIFAEIENCSS-RMVVPKAAIYQTQ 271  

                   tyvaysnakykktVaeeeeegsgcpvapgssglskvkklepllvankekg
                    ++a++                             ++k++++lvan++++
   mKIAA1376   272 AFYAKG-----------------------------KMKEVKQLVANLRGE 292  

                   gvaldgklkfegdtlakvliPstlptegtlkecpgdlIqVsYklkVklsl
                   ++  + + +++g+ l   +iP++ p+   + +c +  I+V+Y+l V+++ 
   mKIAA1376   293 SLSSGKTETWNGKLL---KIPPVSPS---ILDCSI--IRVEYSLMVYVDI 334  

                   sgglgdglgselklelPitigtvpp<-*
                   +      ++ +l l lP++igt+p+   
   mKIAA1376   335 P------GAMDLLLSLPLVIGTIPL    353  

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