hmmpfam - search a single seq against HMM database
HMMER 2.1.1 (Dec 1998)
Copyright (C) 1992-1998 Washington University School of Medicine
HMMER is freely distributed under the GNU General Public License (GPL).
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HMM file:                 /data11/genetics/InterProScan/iprscan/data/Pfam
Sequence file:            /cdna4/rodent/full/goal/mpm/mpm06060/w3open/interpro/cnk_1/seq.in
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Query:  mKIAA1367  ( 809 res)   mpm06060

Scores for sequence family classification (score includes all domains):
Model       Description                                 Score    E-value  N 
--------    -----------                                 -----    ------- ---
RMMBL       RNA-metabolising metallo-beta-lactamase      60.0      5e-14   1
Lactamase_B Metallo-beta-lactamase superfamily           19.3      0.075   1

Parsed for domains:
Model       Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
--------    ------- ----- -----    ----- -----      -----  -------
Lactamase_B   1/1      44   216 ..     1   160 []    19.3    0.075
RMMBL         1/1     554   596 ..     1    45 []    60.0    5e-14

Alignments of top-scoring domains:
Lactamase_B: domain 1 of 1, from 44 to 216: score 19.3, E = 0.075
                   *->gvnsyLvegggeavLiDtGlg.daalll...lgldpkdidaillTHa
                      +  +yL++ ++ ++L D+G+++ +   + ++l+++  +ida+ll+H 
   mKIAA1367    44    SALCYLLQVDEFRFLLDCGWDeHFSVDIidsLRKHVHQIDAVLLSHP 90   

                   HlDHiGGlp.elleafpapvvaa.eda.al....................
                   ++ H G+lp ++ +++ ++ ++a+ +  +++     +   ++++ ++   
   mKIAA1367    91 DPLHLGALPfAVGKLGLNCAIYAtIPVyKMgqmfmydlyqsrhntedftl 140  

                   ........................g.gi.g.gt.levthtpghgpghvvv
                      ++ +   ++    + +   + +++++g  ++  + ++ ++g+   +v
   mKIAA1367   141 ftlddvdaafdkiqqlkfsqivnlKgKGhGlSItPLPAGHMIGGTIWKIV 190  

                   ylp.gkvlftGDllfs.gtgr.dlliaestyslrklpggdaedlypslae
                    ++++ ++++ D+ + +++ +++                           
   mKIAA1367   191 KDGeEEIVYAVDFNHKrEIHLnGC-------------------------- 214  

                   lllesllklaalpdtvvpPgH<-*
                                      +    
   mKIAA1367   215 -------------------SL    216  

RMMBL: domain 1 of 1, from 554 to 596: score 60.0, E = 5e-14
                   *->evipvrarVetidgfSGHADqreLlefikllpkPkkvilVHGEpr<-
                      e+i+++arV +i +++G +D+++++++i+++ kP+++i+VHG p+  
   mKIAA1367   554    ESIEIKARVTYI-DYEGRSDGDSIKKIINQM-KPRQLIIVHGPPE   596  

                   *
                    
   mKIAA1367     -   -    

//