hmmpfam - search a single seq against HMM database
HMMER 2.1.1 (Dec 1998)
Copyright (C) 1992-1998 Washington University School of Medicine
HMMER is freely distributed under the GNU General Public License (GPL).
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
HMM file:                 /data11/genetics/InterProScan/iprscan/data/smart.HMMs
Sequence file:            /cdna4/rodent/full/goal/mbp/mbp05187/w3open/interpro/cnk_1/seq.in
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
Query:  mKIAA1348  ( 539 res)   mbp05187

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
PP2Cc    Serine/threonine phosphatases, family 2C, ca   323.1      2e-92   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
PP2Cc      1/1     103   525 ..     1   338 []   323.1    2e-92

Alignments of top-scoring domains:
PP2Cc: domain 1 of 1, from 103 to 525: score 323.1, E = 2e-92
                   *->es.sgknlglrygl..gessmqgwrkpmEDahvirp.......ffgV
                      +  +++n+g+ +++ ++es++  +++p ED+  + +  ++++ +fg+
   mKIAA1348   103    HKvLDFNNGVPNSVlrFESNQLAANSPVEDRQGVATcvqtngmMFGI 149  

                   fDGHGGseaakflsknlheilaeelsfdkdeslkene.e.lk.d.ep...
                   fDGHGG+++a+ +s++l+ ++a +l ++++ +++e+++e++k++ ++ + 
   mKIAA1348   150 FDGHGGHACAQAVSERLFYYMAVSLMSHQTLEQMEEAtEnMKpLlPIlrw 199  

                   ...................ess.e.r.ln.gdksledveealrkaFlrtd
                    ++++++  ++ ++ + ++++  +++ l+ ++   +++eeal ++F+r+d
   mKIAA1348   200 lkhpgdsiykdvtsvhldhLRVyWqElLDlHMEMGLSIEEALMYSFQRLD 249  

                   eei........................sTAvvalirgnklyvANvGDSRa
                   ++i+ + + + +++ +++ + +   +++TA++a++ g +l+vAN+GD+Ra
   mKIAA1348   250 SDIsleiqapledevtrnlslqvafsgATACMAHVNGVHLHVANAGDCRA 299  

                   vLcrngkd.swegvrtysavqLteDHkpsnedEreRIeaaGGevepidre
                   +L+ + +++ w      s+++Lt DH+++ne+E++R++++++e e  dr 
   mKIAA1348   300 ILGVQEENgAW------SCLPLTCDHNAWNEAELSRLKREHPESE--DRT 341  

                   fvsngggvvwRvnGvvisLavsRalGDfelKk.ked.e.lie.....en.
                    ++++     R++Gv   L++ Ra+GD++lK++ke+++++++++ ++e+ 
   mKIAA1348   342 LIIDD-----RLLGV---LMPCRAFGDVQLKWsKELqRnVLArgfdtEAl 383  

                   rlyekfdprlpgkepyvsaePevtvvelsqtlvptedddfliLASDGLWD
                   ++y+ f+p+++ ++py++a Pevt+++l      + +d+fl+LASDGLWD
   mKIAA1348   384 NIYQ-FTPPHYYTPPYLTAKPEVTYHRL------RRQDKFLVLASDGLWD 426  

                   vlsnqeavdivrkhlrkgddk.evksaaqela.r.a.dsl.r..skkhnd
                   +l n+++v +v  hl+k +  ++ +++++++++  ++  l+r+ s+ h +
   mKIAA1348   427 MLGNEDVVRLVVGHLSKVGRHkPDLDQRPANLgLmQsLLLqRkaSGLHAA 476  

                   pkeaaklLvdlAl...........................kDNiTvvvv<
                   ++  a++L++ A+++++ ++ ++++     + +++  +  +D+iTv+vv 
   mKIAA1348   477 DQNTATHLIRHAIgsneygemeperlaamltlpedvarmyRDDITVMVV  525  

                   -*
                     
   mKIAA1348     -    -    

//