hmmpfam - search a single seq against HMM database
HMMER 2.1.1 (Dec 1998)
Copyright (C) 1992-1998 Washington University School of Medicine
HMMER is freely distributed under the GNU General Public License (GPL).
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HMM file:                 /data11/genetics/InterProScan/iprscan/data/smart.HMMs
Sequence file:            /cdna4/rodent/full/goal/mpm/mpm09174/w3open/interpro/cnk_1/seq.in
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Query:  mKIAA1334  ( 992 res)   mpm09174

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
ANK      ankyrin repeats                                153.6    2.1e-41   6

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
ANK        1/6      65    94 ..     1    30 []    36.8    3e-06
ANK        2/6      98   130 ..     1    30 []    31.4  0.00013
ANK        3/6     131   160 ..     1    30 []    26.5   0.0037
ANK        4/6     164   193 ..     1    30 []    33.1  3.9e-05
ANK        5/6     197   226 ..     1    30 []    32.7  4.9e-05
ANK        6/6     230   260 ..     1    30 []     3.4  1.6e+03

Alignments of top-scoring domains:
ANK: domain 1 of 6, from 65 to 94: score 36.8, E = 3e-06
                   *->dGrTpLHlAaengnlevvklLldkgadina<-*
                      +G+T++HlAa++g++e++k ++ +g+d++a   
   mKIAA1334    65    EGKTAFHLAAAKGHVECLKVMVTHGVDVTA    94   

ANK: domain 2 of 6, from 98 to 130: score 31.4, E = 0.00013
                   *->dGrTpLHlAaengnlevvklLldkga...dina<-*
                       G+++LH+Aa+ng++e+++ Ll+++ + ++i+    
   mKIAA1334    98    SGHSALHVAAKNGHPECIRKLLQYKSpaeNIDN    130  

ANK: domain 3 of 6, from 131 to 160: score 26.5, E = 0.0037
                   *->dGrTpLHlAaengnlevvklLldkgadina<-*
                       G+T+LH+Aa+ g l  v+lL +++  in+   
   mKIAA1334   131    SGKTALHYAAAQGCLQAVQLLCEHKSPINL    160  

ANK: domain 4 of 6, from 164 to 193: score 33.1, E = 3.9e-05
                   *->dGrTpLHlAaengnlevvklLldkgadina<-*
                      dG+ pL +A++ng+ e +++Lld+gad+n    
   mKIAA1334   164    DGNIPLLVAVQNGHSEACHFLLDHGADVNS    193  

ANK: domain 5 of 6, from 197 to 226: score 32.7, E = 4.9e-05
                   *->dGrTpLHlAaengnlevvklLldkgadina<-*
                      +GrT+L+lA+e+g+ ++v +L++kgad+ +   
   mKIAA1334   197    NGRTALMLACETGSSNTVDALIKKGADLSL    226  

ANK: domain 6 of 6, from 230 to 260: score 3.4, E = 1.6e+03
                   *->dGrTpLHlAaengnlevvklLldkga.dina<-*
                       G+++LH+   + n  + +lLl+k  +d ++   
   mKIAA1334   230    LGHNALHYSKLSENAGIQNLLLSKISqDADL    260  

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