hmmpfam - search a single seq against HMM database
HMMER 2.1.1 (Dec 1998)
Copyright (C) 1992-1998 Washington University School of Medicine
HMMER is freely distributed under the GNU General Public License (GPL).
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HMM file:                 /data11/genetics/InterProScan/iprscan/data/Pfam
Sequence file:            /cdna4/rodent/full/goal/mbg/mbg10179/w3open/interpro/cnk_1/seq.in
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Query:  mKIAA1316  ( 1441 res)   mbg10179

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
HEAT     HEAT repeat                                     37.5    3.1e-07   6

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
HEAT       1/6     207   243 ..     1    36 []     4.8       53
HEAT       2/6     252   288 ..     1    36 []    18.2      0.2
HEAT       3/6     333   370 ..     1    36 []     8.0       19
HEAT       4/6     465   501 ..     1    36 []    10.7      7.7
HEAT       5/6     665   701 ..     1    36 []     3.5       80
HEAT       6/6    1249  1285 ..     1    36 []     7.5       22

Alignments of top-scoring domains:
HEAT: domain 1 of 6, from 207 to 243: score 4.8, E = 53
                   *->e.lldellplllkllnDpdpeVReaAaeaLgalaevl<-*
                        +l++ll+ + +  +     V++ +++a+++l++++   
   mKIAA1316   207    VlILEQLLNSIKHTKGARQQTVQLHVVSAISNLLKYV    243  

HEAT: domain 2 of 6, from 252 to 288: score 18.2, E = 0.2
                   *->e.lldellplllkllnDpdpeVReaAaeaLgalaevl<-*
                       +++  +l l+l +l++p p  R+aA ea ++la+v+   
   mKIAA1316   252    PeVRRLVLTLVLGALESPTPLLRCAASEAWARLAQVA    288  

HEAT: domain 3 of 6, from 333 to 370: score 8.0, E = 19
                   *->e.lldellplllkllnDp.dpeVReaAaeaLgalaevl<-*
                       ++l++ + +l +l +D+++p+V+  A+ +L+  ++ +   
   mKIAA1316   333    PqHLSSCIGVLYTLSQDStSPDVQTWALHSLSLTIDSA    370  

HEAT: domain 4 of 6, from 465 to 501: score 10.7, E = 7.7
                   *->e.lldellplllkllnDpdpeVReaAaeaLgalaevl<-*
                         l++l+ +l+  l++p    R+a++ +L +l++     
   mKIAA1316   465    HvNLSSLVSCLCVNLCSPYLLLRRAVLACLRQLVQRE    501  

HEAT: domain 5 of 6, from 665 to 701: score 3.5, E = 80
                   *->e.lldellplllkllnDpdpeVReaAaeaLgalaevl<-*
                        +l +l+ + + +++D ++  R++ + +L  +++ +   
   mKIAA1316   665    VlHLADLIRMAFMAATDHSDQLRLSGLDTLLVVIRRF    701  

HEAT: domain 6 of 6, from 1249 to 1285: score 7.5, E = 22
                   *->e.lldellplllkllnDpdpeVReaAaeaLgalaevl<-*
                        l+++ ++ +  +l+++d+ V++ +++ L ++ ++    
   mKIAA1316  1249    PcLQNRCIEKFKAALESKDSVVQMKTCQLLHSIFQYP    1285 

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