hmmpfam - search a single seq against HMM database
HMMER 2.1.1 (Dec 1998)
Copyright (C) 1992-1998 Washington University School of Medicine
HMMER is freely distributed under the GNU General Public License (GPL).
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HMM file:                 /data11/genetics/InterProScan/iprscan/data/smart.HMMs
Sequence file:            /cdna4/rodent/full/goal/mek/mek01601/w3open/interpro/cnk_1/seq.in
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Query:  mKIAA1299  ( 306 res)   mek01601

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
PH       Pleckstrin homology domain.                     39.1    6.1e-07   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
PH         1/1     161   292 ..     1    82 []    39.1  6.1e-07

Alignments of top-scoring domains:
PH: domain 1 of 1, from 161 to 292: score 39.1, E = 6.1e-07
                   *->vikeGwLlkks..........................k.swkkryfv
                      +++e  L+ ++     +++ + +++++  + ++++++ ++w+k+ + 
   mKIAA1299   161    IQREELLSFMGaeeaapdpagvgrgggaagltsggggQpQWQKCRLL 207  

                   Lfn.......gvLlyyksk...kpkgsipLsgc.svre.p.........c
                   L+++++++++++L ++ +++ ++p+ sip s+++ vr  +  + ++++++
   mKIAA1299   208 LRSegeggggSRLEFFVPPkasRPRLSIPCSTItDVRTaTalempdrenT 257  

                   Feivt.dr.tlllqAeseeereeWvealqsaiaka<-*
                   F ++ ++ ++++l ++++ + + Wv+ +q+++++    
   mKIAA1299   258 FVVKVeGPsEYILETSDALHVKAWVSDIQECLSPG    292  

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