hmmpfam - search a single seq against HMM database
HMMER 2.1.1 (Dec 1998)
Copyright (C) 1992-1998 Washington University School of Medicine
HMMER is freely distributed under the GNU General Public License (GPL).
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HMM file:                 /data11/genetics/InterProScan/iprscan/data/smart.HMMs
Sequence file:            /cdna4/rodent/full/goal/mfj/mfj39015/w3open/interpro/cnk_1/seq.in
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Query:  mKIAA1295  ( 91 res)   mfj39015

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
SH3      Src homology 3 domains                          41.7    9.9e-08   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
SH3        1/1      33    91 .]     1    58 []    41.7  9.9e-08

Alignments of top-scoring domains:
SH3: domain 1 of 1, from 33 to 91: score 41.7, E = 9.9e-08
                   *->eyvvAlYDyeaqnedELsFkkGDiitvleksddgWweGelnr..tGk
                        +vA+ ++e+ +ed  sF++G +++v ek+++gWw +++ ++    
   mKIAA1295    33    SLYVAVANFEG-DEDTSSFQEGTVFEVREKNSSGWWFCQVLSgaPSW 78   

                   eGlfPsnYVeeie<-*
                   eG++PsnY+++++   
   mKIAA1295    79 EGWIPSNYLRKKP    91   

//