hmmpfam - search a single seq against HMM database
HMMER 2.1.1 (Dec 1998)
Copyright (C) 1992-1998 Washington University School of Medicine
HMMER is freely distributed under the GNU General Public License (GPL).
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HMM file:                 /data11/genetics/InterProScan/iprscan/data/smart.HMMs
Sequence file:            /cdna4/rodent/full/goal/mbh/mbh02572/w3open/interpro/cnk_1/seq.in
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Query:  mKIAA1269  ( 411 res)   mbh02572

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
SAND     SAND domain                                     40.1    2.9e-07   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
SAND       1/1       1    44 [.     1    76 []    40.1  2.9e-07

Alignments of top-scoring domains:
SAND: domain 1 of 1, from 1 to 44: score 40.1, E = 2.9e-07
                   *->selPvtCGavkGiLykkkFkcPGirvkCIqvedegewlTPkEFeieg
                                                    +++  ++++PkEF++++
   mKIAA1269     1    ------------------------------YDE--HVISPKEFVHLA 15   

                   gkgksKDWKrsIRcgGssLRtLmengtLd<-*
                   gk++ KDWKr+IR++G++LR++m++g+Ld   
   mKIAA1269    16 GKSTLKDWKRAIRMNGIMLRKIMDSGELD    44   

//