hmmpfam - search a single seq against HMM database
HMMER 2.1.1 (Dec 1998)
Copyright (C) 1992-1998 Washington University School of Medicine
HMMER is freely distributed under the GNU General Public License (GPL).
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HMM file:                 /data11/genetics/InterProScan/iprscan/data/Pfam
Sequence file:            /cdna4/rodent/full/goal/mbh/mbh02572/w3open/interpro/cnk_1/seq.in
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Query:  mKIAA1269  ( 411 res)   mbh02572

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
SAND     SAND domain                                     28.1    4.8e-05   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
SAND       1/1       1    44 [.     1    86 []    28.1  4.8e-05

Alignments of top-scoring domains:
SAND: domain 1 of 1, from 1 to 44: score 28.1, E = 4.8e-05
                   *->eenvdfkaselPqvTCGevkGiLykkkFksPGisvkCIqyedGkwlT
                                                             y++ ++++
   mKIAA1269     1    ---------------------------------------YDE-HVIS 7    

                   PkeFEiegGkgrsKDWKrsIRcgRSGssLreLmengtld<-*
                   PkeF++++Gk+++KDWKr+IR++  G++Lr++m++g+ld   
   mKIAA1269     8 PKEFVHLAGKSTLKDWKRAIRMN--GIMLRKIMDSGELD    44   

//