hmmpfam - search a single seq against HMM database
HMMER 2.1.1 (Dec 1998)
Copyright (C) 1992-1998 Washington University School of Medicine
HMMER is freely distributed under the GNU General Public License (GPL).
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HMM file:                 /data11/genetics/InterProScan/iprscan/data/smart.HMMs
Sequence file:            /cdna4/rodent/full/goal/mbg/mbg10338/w3open/interpro/cnk_1/seq.in
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Query:  mKIAA1255  ( 176 res)   mbg10338

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
FYVE     Protein present in Fab1, YOTB, Vac1, and EEA   108.2    9.3e-28   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
FYVE       1/1     106   172 ..     1    81 []   108.2  9.3e-28

Alignments of top-scoring domains:
FYVE: domain 1 of 1, from 106 to 172: score 108.2, E = 9.3e-28
                   *->etaphWvpDeeasnClmnCgkeFtlvtrRrHHCRnCGrifCskCssk
                       ++p+W+++   snC ++C ++F++ t+R+HHCR+CGr++C+kCs+k
   mKIAA1255   106    SKEPPWCDG---SNC-YECTAKFGV-TTRKHHCRHCGRLLCHKCSTK 147  

                   kaplpklgkekkngknedftpvRVCdsCyerlsk<-*
                   ++p++k+  +k         pvRVC+ C++ l     
   mKIAA1255   148 EIPIIKFDLNK---------PVRVCNICFDVLTL    172  

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