hmmpfam - search a single seq against HMM database
HMMER 2.1.1 (Dec 1998)
Copyright (C) 1992-1998 Washington University School of Medicine
HMMER is freely distributed under the GNU General Public License (GPL).
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HMM file:                 /data11/genetics/InterProScan/iprscan/data/smart.HMMs
Sequence file:            /cdna4/rodent/full/goal/mbg/mbg07525/w3open/interpro/cnk_1/seq.in
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Query:  mKIAA1250  ( 1693 res)   mbg07525

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
ANK      ankyrin repeats                                245.0      6e-69   9

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
ANK        1/9      21    50 ..     1    30 []    38.6  8.5e-07
ANK        2/9      54    83 ..     1    30 []    25.1   0.0094
ANK        3/9      87   116 ..     1    30 []    36.2  4.6e-06
ANK        4/9     120   149 ..     1    30 []    21.6     0.11
ANK        5/9     153   182 ..     1    30 []    30.6  0.00021
ANK        6/9     186   215 ..     1    30 []    28.1   0.0012
ANK        7/9     219   248 ..     1    30 []    23.6    0.028
ANK        8/9     252   281 ..     1    30 []    27.6   0.0017
ANK        9/9     285   316 ..     1    30 []    15.4      7.9

Alignments of top-scoring domains:
ANK: domain 1 of 9, from 21 to 50: score 38.6, E = 8.5e-07
                   *->dGrTpLHlAaengnlevvklLldkgadina<-*
                       G+T+L++A+++g+ +vv+lLl++ga++ +   
   mKIAA1250    21    GGWTALMWACYKGRTDVVELLLSHGANPSV    50   

ANK: domain 2 of 9, from 54 to 83: score 25.1, E = 0.0094
                   *->dGrTpLHlAaengnlevvklLldkgadina<-*
                      +   p+ +Aa +g+ ++v+lLl++ga +n+   
   mKIAA1250    54    YSVYPIIWAAGRGHADIVHLLLQNGAKVNC    83   

ANK: domain 3 of 9, from 87 to 116: score 36.2, E = 4.6e-06
                   *->dGrTpLHlAaengnlevvklLldkgadina<-*
                      +G TpL +Aa++g+le+vk+Ll  gad++    
   mKIAA1250    87    YGTTPLVWAARKGHLECVKHLLAMGADVDQ    116  

ANK: domain 4 of 9, from 120 to 149: score 21.6, E = 0.11
                   *->dGrTpLHlAaengnlevvklLldkgadina<-*
                      + +T+L +A++ g+   vk++l++++++n+   
   mKIAA1250   120    NSMTALIVAVKGGYTQSVKEILKRNPNVNL    149  

ANK: domain 5 of 9, from 153 to 182: score 30.6, E = 0.00021
                   *->dGrTpLHlAaengnlevvklLldkgadina<-*
                      dG+T+L++A ++g++e+v+ Lld+g  +n+   
   mKIAA1250   153    DGNTALMIASKEGHIEIVQDLLDAGTYVNI    182  

ANK: domain 6 of 9, from 186 to 215: score 28.1, E = 0.0012
                   *->dGrTpLHlAaengnlevvklLldkgadina<-*
                       G+T L  A++ g++e+v++Ll+k adi++   
   mKIAA1250   186    SGDTVLIGAVRGGHVEIVRALLQKYADIDI    215  

ANK: domain 7 of 9, from 219 to 248: score 23.6, E = 0.028
                   *->dGrTpLHlAaengnlevvklLldkgadina<-*
                      d++T+L++A+e+gn  +v+ +l+ ++d ++   
   mKIAA1250   219    DNKTALYWAVEKGNATMVRDILQCNPDTEI    248  

ANK: domain 8 of 9, from 252 to 281: score 27.6, E = 0.0017
                   *->dGrTpLHlAaengnlevvklLldkgadina<-*
                      dG TpL  A +  n+evv+lLldkga + a   
   mKIAA1250   252    DGETPLIKATKMRNIEVVELLLDKGARVSA    281  

ANK: domain 9 of 9, from 285 to 316: score 15.4, E = 7.9
                   *->dGrTpLHlAaengnlevvklLldkga..dina<-*
                       G+TpLH+A++  +  +++lLl++  ++ + +   
   mKIAA1250   285    KGDTPLHVAIRGRSRRLAELLLRNPKdgRLLY    316  

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