hmmpfam - search a single seq against HMM database
HMMER 2.1.1 (Dec 1998)
Copyright (C) 1992-1998 Washington University School of Medicine
HMMER is freely distributed under the GNU General Public License (GPL).
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HMM file:                 /data11/genetics/InterProScan/iprscan/data/Pfam
Sequence file:            /cdna4/rodent/full/goal/mtk/mtk02549/w3open/interpro/cnk_1/seq.in
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Query:  mKIAA1248  ( 308 res)   mtk02549

Scores for sequence family classification (score includes all domains):
Model         Description                               Score    E-value  N 
--------      -----------                               -----    ------- ---
Ndr           Ndr family                                520.2   1.5e-152   1
Abhydrolase_1 alpha/beta hydrolase fold                  -3.9      0.026   1

Parsed for domains:
Model         Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
--------      ------- ----- -----    ----- -----      -----  -------
Abhydrolase_1   1/1      32   245 ..     1   235 []    -3.9    0.026
Ndr             1/1       1   255 [.     1   300 []   520.2 1.5e-152

Alignments of top-scoring domains:
Abhydrolase_1: domain 1 of 1, from 32 to 245: score -3.9, E = 0.026
                   *->frvillDlrGfGkSsrpkrgapdldey...rfddlaedlealldalg
                      f  + +D +G+ +   p    ++  +y+ +++d+la ++ ++l+ l+
   mKIAA1248    32    FVRVHVDAPGMEEGA-P----VFPLGYqypSLDQLADMIPCILQYLN 73   

                   lekpvnlvGhSmGGlialayaakyPelrvkalvlvgpvlpaglsaaltpr
                   +   ++ vG   G+ i  +ya+ +P+  v +lvl++  +p + ++  +++
   mKIAA1248    74 FST-IIGVGVGAGAYILSRYALNHPD-TVEGLVLINI-DPNAKGWMDWAA 120  

                   qgntpglllanffnrllrsveallgradkqffllgrpfvsdflkqfeqwl
                             + ++ l+ s++++   +    f+++++ +++ ++  +  +
   mKIAA1248   121 ---------HKLTG-LTSSIPDMILGHL---FSQEEL-SGNSELIQK--Y 154  

                   sslirqgetdggdgllgaaaalgkllqwdls.alkd...idvPtlviwgt
                   + +i+ + ++    l++    ++++   dl  ++  +++ ++P++++ g+
   mKIAA1248   155 RGIIQHAPNLENIELYW----NSYNNRRDLNfERGGettLKCPVMLVVGD 200  

                   dDplvppdaseklaalipnaevvviddagHlaqlekpeevaelik<-*
                   + p  ++ +   ++    +  + + +d+g  +ql+ p   +e+ k   
   mKIAA1248   201 QAPHEDAVVECNSKLDPTQTSFLKMADSGGQPQLTQPGKLTEAFK    245  

Ndr: domain 1 of 1, from 1 to 255: score 520.2, E = 1.5e-152
                   *->ehiietpcGsvhVtVyGdpkgrkkpvilTYHDlGlNHkSCFqglFns
                                               +i TYHD+GlN+kSCFq+lF +
   mKIAA1248     1    -------------------------AIFTYHDVGLNYKSCFQPLFRF 22   

                   PesmqeilekFciyHVdaPGqedgAasfpegypyPSlddLadmlpaVLdh
                     +mqei+++F+++HVdaPG+e+gA+ fp gy+yPSld+Ladm+p++L++
   mKIAA1248    23 -GDMQEIIQNFVRVHVDAPGMEEGAPVFPLGYQYPSLDQLADMIPCILQY 71   

                   FslksvIGmGvGAGAYILaRFAlkhperVeGLVLinitpkaaGwiewfye
                   ++++++IG+GvGAGAYIL+R+Al+hp++VeGLVLini+p+a+Gw++w+++
   mKIAA1248    72 LNFSTIIGVGVGAGAYILSRYALNHPDTVEGLVLINIDPNAKGWMDWAAH 121  

                   KlssklLkyvGmtdllkdlllaHkFgkeelsnevpnsdkekiVqeYRkll
                   Kl+       G+t++++d++l H+F++eels    ns+   ++q+YR ++
   mKIAA1248   122 KLT-------GLTSSIPDMILGHLFSQEELSG---NSE---LIQKYRGII 158  

                   kerlNpkNlqlyleaynsRrDLtierkgleettravtLkcpvlLvVGdkS
                   ++++N +N++ly+++yn+RrDL++er+g +      tLkcpv+LvVGd++
   mKIAA1248   159 QHAPNLENIELYWNSYNNRRDLNFERGGET------TLKCPVMLVVGDQA 202  

                   PhvdavvecnskLdpkkttllkvadcGglVlqeqPgklteslklFlkGmG
                   Ph+davvecnskLdp++t++lk+ad+Gg+++ +qPgklte++k+Fl+GmG
   mKIAA1248   203 PHEDAVVECNSKLDPTQTSFLKMADSGGQPQLTQPGKLTEAFKYFLQGMG 252  

                   ylp<-*
                   y++   
   mKIAA1248   253 YMA    255  

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