hmmpfam - search a single seq against HMM database
HMMER 2.1.1 (Dec 1998)
Copyright (C) 1992-1998 Washington University School of Medicine
HMMER is freely distributed under the GNU General Public License (GPL).
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HMM file:                 /data11/genetics/InterProScan/iprscan/data/Pfam
Sequence file:            /cdna4/rodent/full/goal/mbp/mbp14023/w3open/interpro/cnk_1/seq.in
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Query:  mKIAA1226  ( 704 res)   mbp14023

Scores for sequence family classification (score includes all domains):
Model        Description                                Score    E-value  N 
--------     -----------                                -----    ------- ---
Peptidase_M3 Peptidase family M3                        725.8     2e-214   1

Parsed for domains:
Model        Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
--------     ------- ----- -----    ----- -----      -----  -------
Peptidase_M3   1/1     251   701 ..     1   509 []   725.8   2e-214

Alignments of top-scoring domains:
Peptidase_M3: domain 1 of 1, from 251 to 701: score 725.8, E = 2e-214
                   *->llkespdrelRkeayrAfysraaqyrntlGsneNsalLeellklRae
                      ++k+++ +e+R+++++Af++r+++        eN+ +L+ ll lRa+
   mKIAA1226   251    VMKKCCVPETRRKMEMAFHTRCKE--------ENTIILQQLLPLRAQ 289  

                   llfnAkllgypsyaeaaLedkMakiPetVydFLeelvnklrPllerelal
                   +   Akllgy+++a+++Le ++ak+  +V++FL++l++kl+Pl+e+e+++
   mKIAA1226   290 V---AKLLGYNTHADFVLELNTAKSTSHVATFLDDLSQKLKPLGEAEREF 336  

                   lkkmkkkelekplGlefdpelqpWDvaYYsekqreelydPqlldqeelrp
                   +  +kkke+e+ +G  +d+++++WD++YY+ + +e +y+   +dqe+l++
   mKIAA1226   337 ILSLKKKECEE-RGFAYDGKINAWDLHYYMTQTEELKYS---VDQESLKE 382  

                   yFpletvleGLfelferLfGitfveekdaGkkalktLapLGevwheDVrf
                   yFp+e v+eGL+ ++++L+G++f+++ da            +vw + V++
   mKIAA1226   383 YFPIEVVTEGLLSIYQELLGLSFEQVADA------------HVWNKSVSL 420  

                   yeVfDeilsggllgefYlDlyeRkgKrgGAysfglvggrperkddddGsr
                   y V D+ ++g++lg+fYlDly+R+gK+++A++fgl++g+  +++  dGsr
   mKIAA1226   421 YTVKDK-ATGEVLGQFYLDLYPREGKYNHAACFGLQPGC--LLP--DGSR 465  

                   qlpvpylllNftkaPssgkPsLLthddVeTLFHEfGHsmHsllsrteysy
                   +++v++l+ Nf++ P +g+PsLL hd+V+T+FHEfGH+mH+++++t++++
   mKIAA1226   466 MMSVAALVVNFSQ-PIAGRPSLLRHDEVRTYFHEFGHVMHQICAQTDFAR 514  

                   vsgttnvpiDfaElPSqfmEnwlweplllallarphyetgepipeellek
                   +sgt nv++Df+E+PSq++Enw+w+ ++l++l++ hy +g+pi++ellek
   mKIAA1226   515 FSGT-NVETDFVEVPSQMLENWVWDIDSLRKLSK-HYRDGHPITDELLEK 562  

                   liasknvnaalftfrQlmfAaFDqelHeaaeedqpltdedltdmeyaeLq
                   l+as++vn++l t+rQ++++++Dq+lH++a++d+          eya+ +
   mKIAA1226   563 LVASRLVNTGLLTLRQIVLSKVDQSLHTNASLDAA-------S-EYAKYC 604  

                   kkyygflpvvpldtawpleWarsFgHlfaiGPHgYaAnYYsYlyAevliA
                    +++g + ++p +t++p+    +FgHl a G  gY+++YY+Yl++ev+  
   mKIAA1226   605 TEILG-VAATP-GTNMPA----TFGHL-A-G--GYDGQYYGYLWSEVF-- 642  

                   Aldifekffeqd.plneealretGeryykeiLsrGGSldplellkkfggr
                   ++d+f+ +f +++++n    +e+G++y++ iL++GGSld +++l +f++r
   mKIAA1226   643 SMDMFHSCFRKEgIMN----PEVGMKYRNLILKPGGSLDGMDMLQNFLQR 688  

                   epsadallralgl<-*
                   ep+++a+l+++gl   
   mKIAA1226   689 EPNQKAFLMSRGL    701  

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