hmmpfam - search a single seq against HMM database
HMMER 2.1.1 (Dec 1998)
Copyright (C) 1992-1998 Washington University School of Medicine
HMMER is freely distributed under the GNU General Public License (GPL).
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HMM file:                 /data11/genetics/InterProScan/iprscan/data/smart.HMMs
Sequence file:            /cdna4/rodent/full/goal/mbg/mbg06326/w3open/interpro/cnk_1/seq.in
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Query:  mKIAA1222  ( 395 res)   mbg06326

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
SAM      Sterile alpha motif.                            68.2      1e-15   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
SAM        1/1     286   352 ..     1    67 []    68.2    1e-15

Alignments of top-scoring domains:
SAM: domain 1 of 1, from 286 to 352: score 68.2, E = 1e-15
                   *->vs.wspesVaeWLesigleqYadnFrkngidgeelllltseedLkel
                      v++ws+ +V+ WL+s+ l+qY++ F+++ i+ge+ll+l+  + Lk l
   mKIAA1222   286    VHeWSVQQVSHWLMSLSLDQYVPEFSAQSISGEQLLQLD-GNKLKAL 331  

                   GitllGhRkkIlsaiqklkeq<-*
                   G+t+ ++R    ++++++k +   
   mKIAA1222   332 GMTSSQDRALVKKKLKEMKMS    352  

//