hmmpfam - search a single seq against HMM database
HMMER 2.1.1 (Dec 1998)
Copyright (C) 1992-1998 Washington University School of Medicine
HMMER is freely distributed under the GNU General Public License (GPL).
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HMM file:                 /data11/genetics/InterProScan/iprscan/data/Pfam
Sequence file:            /cdna4/rodent/full/goal/mbg/mbg00181/w3open/interpro/cnk_1/seq.in
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Query:  mKIAA1187  ( 542 res)   mbg00181

Scores for sequence family classification (score includes all domains):
Model     Description                                   Score    E-value  N 
--------  -----------                                   -----    ------- ---
E-MAP-115 E-MAP-115 family                              297.8    1.4e-85   1

Parsed for domains:
Model     Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
--------  ------- ----- -----    ----- -----      -----  -------
E-MAP-115   1/1     292   449 ..     1   193 []   297.8  1.4e-85

Alignments of top-scoring domains:
E-MAP-115: domain 1 of 1, from 292 to 449: score 297.8, E = 1.4e-85
                   *->APgkaensaAlsKptAGTTDaeEAtrLLAEKRRqAReQrEkEEqERr
                      AP+ a++s+++sKp+AGTTD+eEAtrLLAEKRRqAReQrE+EEqER 
   mKIAA1187   292    APPTAAPSVTPSKPMAGTTDREEATRLLAEKRRQAREQREREEQERK 338  

                   eqeErdrrkREElkrraaEeRtlrrEeEARrrEeeraRekeekKKqEGEE
                   +q+Erd+r+REE+++r+aE+R ++rE+EARrrEe++aRek+++       
   mKIAA1187   339 LQAERDKRMREEQLAREAEAR-AEREAEARRREEQEAREKAQA------- 380  

                   KRKAGEElkRkAEEeLLLKekrEqEeqErAmiqkQKEeAEaraREeAErv
                                         EqEeqEr  +qkQKEeAEar+REeAEr+
   mKIAA1187   381 ----------------------EQEEQER--LQKQKEEAEARSREEAERQ 406  

                   RlEREkhfqqeEQERlERkKRLeEIMKRTRksevsekVKkeDskeG<-*
                   R+EREkhfq+eEQER+ER+KRLeEIMKRTRkse+ e+    D+      
   mKIAA1187   407 RQEREKHFQKEEQERQERRKRLEEIMKRTRKSEAAET---KDPVKA    449  

//