hmmpfam - search a single seq against HMM database
HMMER 2.1.1 (Dec 1998)
Copyright (C) 1992-1998 Washington University School of Medicine
HMMER is freely distributed under the GNU General Public License (GPL).
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HMM file:                 /data11/genetics/InterProScan/iprscan/data/Pfam
Sequence file:            /cdna4/rodent/full/goal/mph/mph04621/w3open/interpro/cnk_1/seq.in
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Query:  mKIAA1181  ( 320 res)   mph04621

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
DUF1692  Protein of unknown function (DUF1692)          323.7    2.1e-93   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
DUF1692    1/1     115   317 ..     1   241 []   323.7  2.1e-93

Alignments of top-scoring domains:
DUF1692: domain 1 of 1, from 115 to 317: score 323.7, E = 2.1e-93
                   *->kdddgklieqckregfveklkkqkesne.GCRiyGtleVNKVaGnFH
                      ++ d++++++++++g++++ +k + +n+ GCR++G++++NKV+GnFH
   mKIAA1181   115    VGLDIQDEMGRHEVGHIDNSMKIPLNNGaGCRFEGQFSINKVPGNFH 161  

                   iaPGssfhqsrihvHdlslyksysnlNfsHvInhLSFGkrvsppldgdvk
                   ++++s++ q+             +n +++H+I++LSFG          ++
   mKIAA1181   162 VSTHSATAQP-------------QNPDMTHTIHKLSFG----------DT 188  

                   klldyppgivnPLDGtskitprrdehlvtyqYflKvVPTeyedlsskgev
                    ++++++g +n+L G  + t   +++l ++ Y+lK+VPT+yed s  g++
   mKIAA1181   189 LQVQNVHGAFNALGGADRLT---SNPLASHDYILKIVPTVYEDKS--GKQ 233  

                   ieTnQYSVTeHerplqggrdedHpnTvhfrGGlPGvFFkYelSPlkViit
                    +++QY+V ++e++++++++++          +P+++F Y+lSP++V++t
   mKIAA1181   234 RYSYQYTVANKEYVAYSHTGRI----------IPAIWFRYDLSPITVKYT 273  

                   EerrstFshFltnlCAIIGGvftVAGilDriiyhaqraikkkklg<-*
                   E+r++ ++ F+t +CAIIGG+ftVAGilD++i++a++a+kk++lg   
   mKIAA1181   274 ERRQP-LYRFITTICAIIGGTFTVAGILDSCIFTASEAWKKIQLG    317  

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