hmmpfam - search a single seq against HMM database
HMMER 2.1.1 (Dec 1998)
Copyright (C) 1992-1998 Washington University School of Medicine
HMMER is freely distributed under the GNU General Public License (GPL).
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HMM file:                 /data11/genetics/InterProScan/iprscan/data/Pfam
Sequence file:            /cdna4/rodent/full/goal/mnh/mnh10335/w3open/interpro/cnk_1/seq.in
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Query:  mKIAA1178  ( 346 res)   mnh10335

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
GYF      GYF domain                                     101.8    1.3e-26   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
GYF        1/1     286   343 ..     1    59 []   101.8  1.3e-26

Alignments of top-scoring domains:
GYF: domain 1 of 1, from 286 to 343: score 101.8, E = 1.3e-26
                   *->vlwlYkDpN.kqgeiqGPFtasqMsqWyqaGYFtdslqvkrldeper
                      v+w+Yk++N++++e++GPFt++qM++W+++GYF+d++++++ld+p++
   mKIAA1178   286    VMWEYKWENtGDAELYGPFTSAQMQTWVSEGYFPDGVYCRKLDPPGG 332  

                   ieplgdlkrligl<-*
                     +++++kr++++   
   mKIAA1178   333 --QFYNSKRIDFE    343  

//