hmmpfam - search a single seq against HMM database
HMMER 2.1.1 (Dec 1998)
Copyright (C) 1992-1998 Washington University School of Medicine
HMMER is freely distributed under the GNU General Public License (GPL).
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HMM file:                 /data11/genetics/InterProScan/iprscan/data/smart.HMMs
Sequence file:            /cdna4/rodent/full/goal/mfj/mfj07349/w3open/interpro/cnk_1/seq.in
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Query:  mKIAA1158  ( 268 res)   mfj07349

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
IG       Immunoglobulin                                  32.5    5.8e-05   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
IG         1/1      83   193 ..     1    58 []    32.5  5.8e-05

Alignments of top-scoring domains:
IG: domain 1 of 1, from 83 to 193: score 32.5, E = 5.8e-05
                   *->pp.vtvkeGesvtLtCas...........titWy.............
                      p++++++ G s +L+C+s  +      ++ + W+ ++ ++++     
   mKIAA1158    83    PSeTEAVQGNSMKLRCIScmkreeveattVVEWFyrpeggkdfliye 129  

                   ............................LtI.nvtpeDsesgGtYtCaat
                    +++++   ++ +++ + +++++ ++ ++t+ nvt++Ds   G YtC ++
   mKIAA1158   130 yrnghqevespfqgrlqwngskdlqdvsITVlNVTLNDS---GLYTCNVS 176  

                   ...sgsasseqgttLtVl<-*
                   +    +a+  ++++ t l   
   mKIAA1158   177 refEFEAHR-PFVKTTRL    193  

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