hmmpfam - search a single seq against HMM database
HMMER 2.1.1 (Dec 1998)
Copyright (C) 1992-1998 Washington University School of Medicine
HMMER is freely distributed under the GNU General Public License (GPL).
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HMM file:                 /data11/genetics/InterProScan/iprscan/data/Pfam
Sequence file:            /cdna4/rodent/full/goal/mpj/mpj02944/w3open/interpro/cnk_1/seq.in
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Query:  mKIAA1153  ( 556 res)   mpj02944

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
Gcd10p   Gcd10p family                                  522.7   2.6e-153   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
Gcd10p     1/1      47   348 ..     1   391 []   522.7 2.6e-153

Alignments of top-scoring domains:
Gcd10p: domain 1 of 1, from 47 to 348: score 522.7, E = 2.6e-153
                   *->qhaiteGdyssvlIVLqredgkklkiVvFkfLkpntkvtlGKfGkFe
                      +h i +Gd+    +VL+red  ++k+V  ++ ++++kvt++K+ +F+
   mKIAA1153    47    DHCIHDGDF----VVLKRED--VFKAV--QV-QRRKKVTFEKQ-WFY 83   

                   lddliGkPfGstFevyvdeekgskgealsrkvkekieekklRlLktkeiK
                   ld++iG+++Gs+F v       s+g            +++lR    k+  
   mKIAA1153    84 LDNAIGHSYGSAFDV-------SSG-----------GSLQLR----KK-- 109  

                   DvnnDKDDGqeEPtasvkekSvdrEVseisessaDNRvviAPsALelvnD
                             eEP  ++k            e+++DNR        ++v D
   mKIAA1153   110 ---------LEEPASETK------------EAGTDNR--------NIV-D 129  

                   dgkaQkLtqEeIeelRAniKeeGlkgeEIIekLienSKTFhnKTefSQEK
                   dgk+QkLtq++I++l    K++G+kgeEI+++LienS+TF++KTef+Q+K
   mKIAA1153   130 DGKSQKLTQDDIKAL----KDKGIKGEEIVQQLIENSTTFRDKTEFAQDK 175  

                   YvkkKkKKYaervlvlrLPsiRllaeayykkDPekildlRvDtLsllLtl
                   Y+kkKkKKY+++v++l+ Ps+R+l+++yy+++P+ki+++R+DtL+++Ltl
   mKIAA1153   176 YIKKKKKKYEAIVTILK-PSTRILSIMYYAREPGKINHMRYDTLAQMLTL 224  

                   aNvkaggnyLVvdeGTgGLllgAllERlGGGDnEskstGkvihiHpGevP
                   +N++ag++++V+++ + GL+lgA++ER+GG       +G++i+++pG +P
   mKIAA1153   225 GNIRAGNKMIVMET-CSGLVLGAMMERMGG-------FGSIIQLYPGDGP 266  

                   qkveavsclnypdetLsrlvevslnkvdsllhksadasakaikvvkaeen
                   ++ +a++c+++p+++Ls+l+e++lnkv+sll ++  +sa ++        
   mKIAA1153   267 VR-AATACFGFPKSFLSGLYEFPLNKVNSLLNGT--FSAEML-------- 305  

                   lkeelkddtlvEEsneTieegekspekiEdselkagkkrnkkrk<-*
                    ++e+kd+t+vEEsn+ +ee+e  ++ +Ed++  a++ ++ +     
   mKIAA1153   306 -SSEPKDSTPVEESNGELEEKEIAEQADEDNIVDAAENNSGEQR    348  

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