hmmpfam - search a single seq against HMM database
HMMER 2.1.1 (Dec 1998)
Copyright (C) 1992-1998 Washington University School of Medicine
HMMER is freely distributed under the GNU General Public License (GPL).
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HMM file:                 /data11/genetics/InterProScan/iprscan/data/smart.HMMs
Sequence file:            /cdna4/rodent/full/goal/mfj/mfj27189/w3open/interpro/cnk_1/seq.in
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Query:  mKIAA1148  ( 1589 res)   mfj27189

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
ANK      ankyrin repeats                                175.6    4.8e-48  11
TPR      Tetratricopeptide repeats                       53.7    2.3e-11   3

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
ANK        1/11    431   463 ..     1    30 []     0.8  3.7e+03
ANK        2/11    467   498 ..     1    30 []     7.1  5.2e+02
ANK        3/11    502   531 ..     1    30 []    18.4     0.98
ANK        4/11    535   564 ..     1    30 []    11.1  1.5e+02
ANK        5/11    575   603 ..     1    30 []     2.7  2.1e+03
ANK        6/11    618   647 ..     1    30 []    19.2      0.6
ANK        7/11    651   680 ..     1    30 []    21.3     0.14
ANK        8/11    684   713 ..     1    30 []    31.6  0.00011
ANK        9/11    717   746 ..     1    30 []    24.4    0.016
ANK       10/11    750   779 ..     1    30 []    31.7  9.8e-05
ANK       11/11    783   812 ..     1    30 []    12.5       59
TPR        1/3     839   872 ..     1    34 []     7.7       68
TPR        2/3     886   919 ..     1    34 []    21.8    0.098
TPR        3/3     920   953 ..     1    34 []    28.8  0.00076

Alignments of top-scoring domains:
ANK: domain 1 of 11, from 431 to 463: score 0.8, E = 3.7e+03
                   *->dGrTpLHlAaen...gnlevvklLldkgadina<-*
                      +G +      +n  + n++v +lL+  ga+in+   
   mKIAA1148   431    EGLSMALASLRNlytPNIKVSRLLILGGANINY    463  

ANK: domain 2 of 11, from 467 to 498: score 7.1, E = 5.2e+02
                   *->dGrTpLHlAaen..gnlevvklLldkgadina<-*
                        +++  l+++++ g+ e+v lLl+ ga+++a   
   mKIAA1148   467    VLNNAPILCVQShlGYTEMVALLLEFGANVDA    498  

ANK: domain 3 of 11, from 502 to 531: score 18.4, E = 0.98
                   *->dGrTpLHlAaengnlevvklLldkgadina<-*
                       G TpL +Aa+ g l++v lL +k a ++    
   mKIAA1148   502    SGLTPLGYAAAAGFLSIVVLLCKKRAKVDH    531  

ANK: domain 4 of 11, from 535 to 564: score 11.1, E = 1.5e+02
                   *->dGrTpLHlAaengnlevvklLldkgadina<-*
                      +G+ +L +Aa +g+levvk+L++ + ++     
   mKIAA1148   535    NGQCALVHAALRGHLEVVKFLIQCDWTMAG    564  

ANK: domain 5 of 11, from 575 to 603: score 2.7, E = 2.1e+03
                   *->dGrTpLHlAaengnlevvklLldkgadina<-*
                        + +L  Aa+ g+ e+v +Lld   + ++   
   mKIAA1148   575    AIQQALIAAASMGYTEIVSYLLDLP-EKDE    603  

ANK: domain 6 of 11, from 618 to 647: score 19.2, E = 0.6
                   *->dGrTpLHlAaengnlevvklLldkgadina<-*
                       G T+L  Aa +g l+v++lLl+ ga +     
   mKIAA1148   618    WGETALTAAAGRGKLDVCRLLLEQGAAVAQ    647  

ANK: domain 7 of 11, from 651 to 680: score 21.3, E = 0.14
                   *->dGrTpLHlAaengnlevvklLldkgadina<-*
                       G  pL   ++ g+  +v lLl +gad+n+   
   mKIAA1148   651    RGAVPLFSTVRQGHWQIVDLLLTHGADVNM    680  

ANK: domain 8 of 11, from 684 to 713: score 31.6, E = 0.00011
                   *->dGrTpLHlAaengnlevvklLldkgadina<-*
                      +GrTpL++Aa++g+l +v +Ll  ga+i +   
   mKIAA1148   684    QGRTPLMMAASEGHLGTVDFLLAQGASIAL    713  

ANK: domain 9 of 11, from 717 to 746: score 24.4, E = 0.016
                   *->dGrTpLHlAaengnlevvklLldkgadina<-*
                      +G T+L +A+ +g+l+vv+ L+d+ga  +    
   mKIAA1148   717    EGLTALSWACLKGHLSVVRSLVDNGAATDH    746  

ANK: domain 10 of 11, from 750 to 779: score 31.7, E = 9.8e-05
                   *->dGrTpLHlAaengnlevvklLldkgadina<-*
                      +GrTpL lAa +g+ evv++L+d+ga i+    
   mKIAA1148   750    NGRTPLDLAAFYGDAEVVQFLVDHGAMIEH    779  

	[output cut off at A = 10 top alignments]
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