hmmpfam - search a single seq against HMM database
HMMER 2.1.1 (Dec 1998)
Copyright (C) 1992-1998 Washington University School of Medicine
HMMER is freely distributed under the GNU General Public License (GPL).
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HMM file:                 /data11/genetics/InterProScan/iprscan/data/smart.HMMs
Sequence file:            /cdna4/rodent/full/goal/mbg/mbg10449/w3open/interpro/cnk_1/seq.in
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Query:  mKIAA1146  ( 342 res)   mbg10449

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
ANK      ankyrin repeats                                 92.5    5.1e-23   5

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
ANK        1/5      43    75 ..     1    30 []    13.0       41
ANK        2/5      84   113 ..     1    30 []    14.7       13
ANK        3/5     117   146 ..     1    30 []    29.3  0.00051
ANK        4/5     150   179 ..     1    30 []    27.6   0.0017
ANK        5/5     202   227 ..     1    30 []     8.0    4e+02

Alignments of top-scoring domains:
ANK: domain 1 of 5, from 43 to 75: score 13.0, E = 41
                   *->dGrTpLHlAaengnlevvklLldkga...dina<-*
                       ++T LH Aa+ g+l +++ Ll++   ++ in+   
   mKIAA1146    43    CDDTRLHDAAYVGDLQTLRNLLQEESyrsRINE    75   

ANK: domain 2 of 5, from 84 to 113: score 14.7, E = 13
                   *->dGrTpLHlAaengnlevvklLldkgadina<-*
                        +TpL +Aa  g+ ++v +L++kga++++   
   mKIAA1146    84    LPCTPLRIAATAGHGNCVDFLIRKGAEVDL    113  

ANK: domain 3 of 5, from 117 to 146: score 29.3, E = 0.00051
                   *->dGrTpLHlAaengnlevvklLldkgadina<-*
                       G+T+L++A+ ng+le  ++Ll++gad+n    
   mKIAA1146   117    KGQTALYVAVVNGHLESTEILLEAGADPNG    146  

ANK: domain 4 of 5, from 150 to 179: score 27.6, E = 0.0017
                   *->dGrTpLHlAaengnlevvklLldkgadina<-*
                      +  Tp ++A + g+ +++k+L+++gad+++   
   mKIAA1146   150    HRSTPVYHASRVGRDDILKALIRYGADVDV    179  

ANK: domain 5 of 5, from 202 to 227: score 8.0, E = 4e+02
                   *->dGrTpLHlAaengnlevvklLldkgadina<-*
                          pL++ a++ nl + +lLl++ga+++    
   mKIAA1146   202    ----PLYISAAYHNLQCFRLLLQAGANPDF    227  

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