hmmpfam - search a single seq against HMM database HMMER 2.1.1 (Dec 1998) Copyright (C) 1992-1998 Washington University School of Medicine HMMER is freely distributed under the GNU General Public License (GPL). - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - HMM file: /data11/genetics/InterProScan/iprscan/data/TIGRFAMs_HMM.LIB Sequence file: /cdna4/rodent/full/goal/meh/meh02020/w3open/interpro/cnk_1/seq.in - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - Query: mKIAA1137 ( 923 res) meh02020 Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- ATPase-Plipid ATPase-Plipid: phospholipid-translocati 666.8 1.1e-196 1 ATPase_P-type ATPase_P-type: ATPase, P-type (transpor 312.1 6.7e-90 6 HAD-SF-IIB HAD-SF-IIB: HAD-superfamily hydrolase, -22.7 0.16 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- ATPase_P-type 1/6 53 144 .. 158 236 .. 64.3 8.3e-16 ATPase_P-type 2/6 221 237 .. 237 253 .. 0.9 37 ATPase_P-type 3/6 263 335 .. 254 315 .. 41.5 7.8e-10 ATPase_P-type 4/6 375 424 .. 317 366 .. 67.6 1.1e-16 HAD-SF-IIB 1/1 379 564 .. 1 261 [] -22.7 0.16 ATPase_P-type 5/6 510 625 .. 356 466 .. 130.5 3e-35 ATPase_P-type 6/6 641 654 .. 465 478 .] 5.8 1.9 ATPase-Plipid 1/1 2 834 .. 1 1249 [] 666.8 1.1e-196 Alignments of top-scoring domains: ATPase_P-type: domain 1 of 6, from 53 to 144: score 64.3, E = 8.3e-16 *->lwtffkiflralillviaiPiaLpvavtialavg......dkrmail ++++f +f+ ++i+l+ ++Pi+L+v+v+++++ ++ + dk+m ++ mKIAA1137 53 FFSGFLSFWSYIIILNTVVPISLYVSVEVIRLGHsyfinwDKKMFCM 99 .......vrslnalEelGqvdyicsDKTGTLTenkmtfkkvyigg<-* +++++ ++r+ +++EelGqv+yi+sDKTGTLT+n m f k++i+g mKIAA1137 100 kkrtpaeARTTTLNEELGQVEYIFSDKTGTLTQNIMVFNKCSING 144 ATPase_P-type: domain 2 of 6, from 221 to 237: score 0.9, E = 37 *->eyqagsPdEkAlvkfak<-* +y+a+sPdE+Alv++a+ mKIAA1137 221 YYKAQSPDEGALVTAAR 237 ATPase_P-type: domain 3 of 6, from 263 to 335: score 41.5, E = 7.8e-10 *->kildvlpFtSerKrMsvivrdpdgk...yvKGApevilercsd.... ++l +l+F+ +rKrMsvivr+p+gk + y+KGA++++l r+++++++ mKIAA1137 263 QLLAILDFNNIRKRMSVIVRNPEGKirlYCKGADTILLDRLHPptqe 309 ....teehleelaseGlRtLavAyke<-* ++t +hl e+a +GlRtL++Ayk+ mKIAA1137 310 llssTTDHLNEYAGDGLRTLVLAYKD 335 ATPase_P-type: domain 4 of 6, from 375 to 424: score 67.6, E = 1.1e-16 *->llGltaieDpLredvketIeeLkraGikvwMlTGDnveTAiaIAkec llG+taieD+L+ +v+etI++L a+ik+w+lTGD++eTA++I+++c mKIAA1137 375 LLGATAIEDKLQQGVPETIALLTLANIKIWVLTGDKQETAVNIGYSC 421 glf<-* +++ mKIAA1137 422 KML 424 HAD-SF-IIB: domain 1 of 1, from 379 to 564: score -22.7, E = 0.16 *->llffDlDGTLldpgpnpeahelseelieaLerLreklgvkvvlvTGR + ++ +l+ ++e++ L+ + ++k++++TG mKIAA1137 379 ----------TAIE-----DKLQQGVPETIALLTLA-NIKIWVLTGD 409 slaeikellkqlnlpfkelpliaenGalifnngeilyieaqlpedvaefl ++ + ++ +++++ +++f+ ++ + e +e + mKIAA1137 410 KQETAVNIGY-------SCKMLTDDMTEVFVVTGHTVL-----EVREELR 447 lseekelkeieailkslseleryvkrvLgtfvedkalavaihyaglkpee + +k + a+ + + ++++ + L e a ++a + +g + mKIAA1137 448 KARKKMVDSSHAVGNGFTYQGNLSSSKLTSVLEAVAGEYALVINGHS--- 494 LVvkllgqelkskllerlekigirfvgvkdekdleleailsrsnplalqk l ++l++++ + +++++ mKIAA1137 495 -----LAHALEADMELEFLETACA-------------------------- 513 egktllevlplagvdKgsAlqalleelnkrsddlkkdeilafGDkTysgN k+++ ++ + +K++ ++ + ++ +la+GD ++N mKIAA1137 514 -CKAVICCRV-TPLQKAQVVELVKKYKK--------AVTLAIGD---GAN 550 Deemfevaglavav<-* D++m++ a+++v++ mKIAA1137 551 DVSMIKTAHIGVGI 564 ATPase_P-type: domain 5 of 6, from 510 to 625: score 130.5, E = 3e-35 *->AiaIAkecglfARvsPeqKaeiVellqkr.gaiVamiGDGaNDapAL +++ +k++ +++Rv+P+qKa++Vel++k+++a++++iGDGaND++++ mKIAA1137 510 TACACKAV-ICCRVTPLQKAQVVELVKKYkKAVTLAIGDGANDVSMI 555 kaADVGiaig......AkaaaDivltddnlslivlllvhGRwtykrikkl k A++G++i+++++ +A+ a+D+++ ++ +l +lllvhGRw+y r++k+ mKIAA1137 556 KTAHIGVGISgqegiqAVLASDYSFSQF-KFLQRLLLVHGRWSYLRMCKF 604 ilyalyynliliillfvlsvi<-* ++y++y+n++++++ f++ ++ mKIAA1137 605 LCYFFYKNFAFTMVHFWFGFF 625 ATPase_P-type: domain 6 of 6, from 641 to 654: score 5.8, E = 1.9 *->vinllftslpalal<-* ++n ++tslp+la+ mKIAA1137 641 LYNIVYTSLPVLAM 654 ATPase-Plipid: domain 1 of 1, from 2 to 834: score 666.8, E = 1.1e-196 *->FpsNkIsTtKYtvlTFlPKnLFeQFkrfANiYFLvvAllqqvPilsp ++++++ mKIAA1137 2 ------------------------------------SASSALF---- 8 tnrgtsivPLavVLlvtaiKeAiEDirRrkrDkevNNrltevLegveNeN mKIAA1137 - -------------------------------------------------- - vltdnIsLWRklKKFIsytkedlseelKkkrisRKRHellvtkTVdtish mKIAA1137 - -------------------------------------------------- - RsSLdSidayrlSvdydrleldeinleqganeasvvdrsltgssdgkFve mKIAA1137 - -------------------------------------------------- - ikWKdlrVGDIvKVkkderiPADllLLSSSepdGvCYVETaNLDGETNLK mKIAA1137 - -------------------------------------------------- - lRqAleeTqkmlteediknfsGeIecEqPnasLYsFqGnlkidgkakskI mKIAA1137 - -------------------------------------------------- - rqlPLspdNiLLRGctLrNTkwviGvVvYTGhDTKlmrNatkaGPsKRSr Lsp+ mKIAA1137 9 ----LSPQ------------------------------------------ 12 iEkelNflIiiLFllLivLclissvgagiysdadgkdldlirwYleldks +F++L+ + i+++g++i+ g Yl d mKIAA1137 13 -----------IFGFLVCMGVILAIGNAIWEHEVGTR---FQVYLPWDEA 48 eRPGGkdYeYrnaaangFfsfltalILFssLIPISLYVslElvKsvQAty +a gF sf+ ++I ++ +PISLYVs+E+++ + + y mKIAA1137 49 V---------DSAFFSGFLSFWSYIIILNTVVPISLYVSVEVIRLGHS-Y 88 FInsDlemYhektDtPasvRtSNLnEeLGQVeYiFSDKTGTLTqNiMeFk FIn+D m k tPa++Rt +LnEeLGQVeYiFSDKTGTLTqNiM F mKIAA1137 89 FINWDKKMFCMKKRTPAEARTTTLNEELGQVEYIFSDKTGTLTQNIMVFN 138 KcsIaGvsYgSdgltevkdalrerkgskveeesakvakDknsmlnelkil KcsI+G+sYg d ++ v ++e g e + ++++ mKIAA1137 139 KCSINGHSYG-DVFD-VLGHKAEL-G-----E--------RPEPVDFS-- 170 ksnsqkapkgftFvdprLvkllktaknkpnakliqeFflaLAiCHtVvPe + a k f F+d+ L+ k ++p + eFf++L +CHtV e mKIAA1137 171 --FNPLADKKFLFWDSSLLEAVKM--GDPHT---HEFFRLLSLCHTVMSE 213 vnddddpeKGeitYQAaSPDEaALVkaArdlGFvfieRtpksIsllieer + +e Ge++Y+A+SPDE+ALV+aAr++GFvf +Rtpk +++ +e mKIAA1137 214 ----EKNE-GELYYKAQSPDEGALVTAARNFGFVFRSRTPK--TITVHEL 256 GkkGkkeekeYeiLnVlEFnSdRKRMSvIvRfPdgnPGDdgrilLlcKGA G +Y++L +l Fn RKRMSvIvR+P+g i+L+cKGA mKIAA1137 257 G-----TAITYQLLAILDFNNIRKRMSVIVRNPEG------KIRLYCKGA 295 DsVifkRLssssGsggnqvieeTkeHLenyAsEGLRTLciAyReLseeEY D++ + RL + T HL+ yA +GLRTL++Ay++L+ee Y mKIAA1137 296 DTILLDRLHP----PTQELLSSTTDHLNEYAGDGLRTLVLAYKDLDEEYY 341 eeWneeYneAstaLtedReekLdevAelIEkdLiLLGaTAIEDKLQeGVP eeW + +As+a + Re++L ++e E d LLGaTAIEDKLQ GVP mKIAA1137 342 EEWARRRLQASLAQD-SREDRLASIYEEVESDMMLLGATAIEDKLQQGVP 390 etIElLreAGIKiWVLTGDKvETAINIGySCrLlsenM.elivIkeesdd etI+lL A+IKiWVLTGDK+ETA NIGySC+ l+ +M+e++v++ + mKIAA1137 391 ETIALLTLANIKIWVLTGDKQETAVNIGYSCKMLTDDMtEVFVVTGHT-- 438 IrelEdagdldater.vveaaikkiLkeyfelegteeefnelkkdhvpsg lE + +l +++ v+ + + + + + +++ + +++ g mKIAA1137 439 --VLEVREELRKARKkMVDSSHAVGNGFTYQGNLSSSKLTSVLE--AVAG 484 nvALvIDGksLkyaLdeeDlekeFLqLAlkCkAViCCRVSPsQKAdVVkL +ALvI G+sL aL+ + e eFL+ A+ CkAViCCRV+P+QKA+VV L mKIAA1137 485 EYALVINGHSLAHALEAD-MELEFLETACACKAVICCRVTPLQKAQVVEL 533 VKkstGrlskiTLAIGDGANDVSMIQeADVGVGIsGkEGmQAvMASDFAI VKk +++TLAIGDGANDVSMI +A++GVGIsG+EG QAv+ASD++ mKIAA1137 534 VKK---YKKAVTLAIGDGANDVSMIKTAHIGVGISGQEGIQAVLASDYSF 580 gQFrFLekLLLVHGrWSYkRiskmIlYfFYKNlifalilFWYsfyngFsG QF+FL +LLLVHGrWSY R++k +YfFYKN +f++ FW++f+ gFs mKIAA1137 581 SQFKFLQRLLLVHGRWSYLRMCKFLCYFFYKNFAFTMVHFWFGFFCGFSA 630 qtlyedWymvlYNvfFTalPVivLGvfDqDvsaslslryPqLYreGqkgk qt y+ ++ lYN ++T+lPV + GvfDqDv ++ s+ yP LY Gq++ mKIAA1137 631 QTVYDQYFITLYNIVYTSLPVLAMGVFDQDVPEQRSMEYPKLYEPGQLNL 680 efstkvFwgwmldglyQSlviFffpilayklgdfvssG.evddfssvGvi f+ + F+ + g+y S Ff+p+ +++ +++ +G++++d+ s v+ mKIAA1137 681 LFNKREFFICIAQGIYTSVLMFFIPYGVFAE-ATRDDGtQLADYQSFAVT 729 vfTalVvvvnlkiaLeinrWnwisliaiwgSiLvwlifviv.....yssi v T+lV+vv ++i+L++ +W+ i + +iwgS+ v+++ ++ +++++ + mKIAA1137 730 VATSLVIVVSVQIGLDTGYWTAINHFFIWGSLAVYFAILFAmhsngLFDM 779 fptlPadisrefykaakrvmstfgFWlvLlvivlisLLPrFtykalqrlf fp f + a ++ + Wl+ ++++++++ P++++++l + mKIAA1137 780 FP-----NQFRFVGNAQNTLAQPTVWLTIALTTAVCIMPVVAFRFLRLSL 824 rPtdyeiVqE<-* +P ++V+ mKIAA1137 825 KPDLSDTVRY 834 //